Click here to switch to the map view.

The map label for this gene is mcp4 [H]

Identifier: 218709527

GI number: 218709527

Start: 1673573

End: 1675267

Strand: Reverse

Name: mcp4 [H]

Synonym: VS_1536

Alternate gene names: 218709527

Gene position: 1675267-1673573 (Counterclockwise)

Preceding gene: 218709533

Following gene: 218709509

Centisome position: 50.78

GC content: 42.18

Gene sequence:

>1695_bases
TTGAGACTACTTATGTATAATTTATCTATGAAAATGAAGATGCTTTTGTCTGCCATTGTACCAGCGATGTTGGTTGCGAT
TGTGACTCTAGTAATTGTTATTAACTCCCAACTATCGGCTCTTGAATATGAAATTCAAGACTACCAAACGGTCTTAACTG
ATGAACGTAAGAACAATATTGAAGATGCGGCTACAATCGCTCAATCTGTAGTTGAAGATGTAGTTCGACGTTTTGGTACA
GGTCCAGAAGCGCAAGAAGCGGTTAGGTTCGCGTTAAAAGAAGCACGTTTTTCTAATGGCAGCGGATACTTCTTTGTGTT
CGACGAAAATGATCACTACATTGTTCACAGTCTAAAGCCTCAACTTGAAGGTAAAGATGGCGGCGGTTTAAAAGATCCGA
ATGGCATCAAAATCACTGTTCGCCTACATGAACAGGCGACGAGAGGTGGTGGTTTCATTGAATACATTTACGACAAACCT
GGATCGTCTGTCCCTCAACCAAAAATTGCTTACGCTGCTCCTATTTCGGGAACGGGTTGGTTCTTAGGTACGGGTCTGTA
TATTGATGACATTGCTAAGGCTACAGAGGTTTACCGTCAAGAAGCCAGTGAGCGTATGGAAACGCAAATTTCAACAATTG
TCATTACTGCGCTTGCATTAGTAGCCCTAACTTGTCTGATCATGTCTTATGTTGCTTCACGCATGATTGCCCCAATCAAA
GACATGCTTAATACCTTTATCGACATTGCGAATGGTGAAGGTGATCTTACCCATCGAATTAATGTGTCGGGTACAGATGA
AATTGGACAATTAGGTAAAGCATTTAACCAGTTTGTCGGCAAGCTCCACAATATTATTACTGATGTTTCGAAAGCTACAA
ATAATGTTACGACGGCCACTGACCAAATAAGTAGCCAAACGGTTCACCTAAGTAATCAACTTCAAGAGCACAACCACGAG
ACAGAGCAGGTAGTGACAGCTGTTACTGAGATGAGTAGTACAGCAAACGAAGTGGCACAAAGTGCTCATCAAGTGGCTAG
TGCAACGAATGAAGCTAACAATGACGCTCATAATGCTCAAAACCTTGTGCAAAAGTCGACACAATCTATTGGCTCTTTAG
AACAGAATGTAGTGACCACAAGTCAACACATGAATTCACTCCACGACCAGTCTAAAAAGATAGATGGTGTGTTACAGGTT
ATTGGCGAGATTGCAGAACAAACTAACTTACTAGCACTAAACGCAGCAATCGAAGCCGCGCGAGCAGGTGAGCAAGGTCG
AGGCTTTGCTGTAGTAGCAGACGAAGTACGTAACCTTGCAAGTAGAACTCAAGGTAGTACGCTAGAGATTAAGACCATGC
TTGATGAACTTCATAAGTTGGTTGAACAAGCGGTTTCTTCGATGGGTGAAAGTAGTAATACTTGTCAGGATGTTGTGACT
TCATCAAATGATATATCAGCGGGTTTAAATGATGTTAGCACCGCTGTAGCCTCAATCAATGCAATGACCGACCATATAGC
AACTGCGGCAACAGAGCAAAGCTCAGTAACGGAAGAGATAAACCGTAACTTGGTGACTATACGTGACATTGTAAGTTCAC
TGCTGATATCGAGTGAAACATCAAGTTCCGCTGTGGATGAACTTAAACAGGCTGGTGGGCAATTAAGCCAACTTGTTGGT
CAATTTAAGCTTTAG

Upstream 100 bases:

>100_bases
GGTGACTTAATGAAAATCGAAATCACCTCATCGATACAATCAATAAGTACGGCGTTTATTTAAAAGAATGCATGATGTAA
TATCTTCGCGAATATAATGT

Downstream 100 bases:

>100_bases
ATACTAAATAAGCATAAACACTCCAATATAAATTAAAAGTGGCGACCAATTGTTAAGCAATTTGGTCGCCACTTTCTATC
AAGCGTCAAGAGTTACATAT

Product: putative histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MRLLMYNLSMKMKMLLSAIVPAMLVAIVTLVIVINSQLSALEYEIQDYQTVLTDERKNNIEDAATIAQSVVEDVVRRFGT
GPEAQEAVRFALKEARFSNGSGYFFVFDENDHYIVHSLKPQLEGKDGGGLKDPNGIKITVRLHEQATRGGGFIEYIYDKP
GSSVPQPKIAYAAPISGTGWFLGTGLYIDDIAKATEVYRQEASERMETQISTIVITALALVALTCLIMSYVASRMIAPIK
DMLNTFIDIANGEGDLTHRINVSGTDEIGQLGKAFNQFVGKLHNIITDVSKATNNVTTATDQISSQTVHLSNQLQEHNHE
TEQVVTAVTEMSSTANEVAQSAHQVASATNEANNDAHNAQNLVQKSTQSIGSLEQNVVTTSQHMNSLHDQSKKIDGVLQV
IGEIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQGSTLEIKTMLDELHKLVEQAVSSMGESSNTCQDVVT
SSNDISAGLNDVSTAVASINAMTDHIATAATEQSSVTEEINRNLVTIRDIVSSLLISSETSSSAVDELKQAGGQLSQLVG
QFKL

Sequences:

>Translated_564_residues
MRLLMYNLSMKMKMLLSAIVPAMLVAIVTLVIVINSQLSALEYEIQDYQTVLTDERKNNIEDAATIAQSVVEDVVRRFGT
GPEAQEAVRFALKEARFSNGSGYFFVFDENDHYIVHSLKPQLEGKDGGGLKDPNGIKITVRLHEQATRGGGFIEYIYDKP
GSSVPQPKIAYAAPISGTGWFLGTGLYIDDIAKATEVYRQEASERMETQISTIVITALALVALTCLIMSYVASRMIAPIK
DMLNTFIDIANGEGDLTHRINVSGTDEIGQLGKAFNQFVGKLHNIITDVSKATNNVTTATDQISSQTVHLSNQLQEHNHE
TEQVVTAVTEMSSTANEVAQSAHQVASATNEANNDAHNAQNLVQKSTQSIGSLEQNVVTTSQHMNSLHDQSKKIDGVLQV
IGEIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQGSTLEIKTMLDELHKLVEQAVSSMGESSNTCQDVVT
SSNDISAGLNDVSTAVASINAMTDHIATAATEQSSVTEEINRNLVTIRDIVSSLLISSETSSSAVDELKQAGGQLSQLVG
QFKL
>Mature_564_residues
MRLLMYNLSMKMKMLLSAIVPAMLVAIVTLVIVINSQLSALEYEIQDYQTVLTDERKNNIEDAATIAQSVVEDVVRRFGT
GPEAQEAVRFALKEARFSNGSGYFFVFDENDHYIVHSLKPQLEGKDGGGLKDPNGIKITVRLHEQATRGGGFIEYIYDKP
GSSVPQPKIAYAAPISGTGWFLGTGLYIDDIAKATEVYRQEASERMETQISTIVITALALVALTCLIMSYVASRMIAPIK
DMLNTFIDIANGEGDLTHRINVSGTDEIGQLGKAFNQFVGKLHNIITDVSKATNNVTTATDQISSQTVHLSNQLQEHNHE
TEQVVTAVTEMSSTANEVAQSAHQVASATNEANNDAHNAQNLVQKSTQSIGSLEQNVVTTSQHMNSLHDQSKKIDGVLQV
IGEIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQGSTLEIKTMLDELHKLVEQAVSSMGESSNTCQDVVT
SSNDISAGLNDVSTAVASINAMTDHIATAATEQSSVTEEINRNLVTIRDIVSSLLISSETSSSAVDELKQAGGQLSQLVG
QFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=308, Percent_Identity=31.4935064935065, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI1787690, Length=385, Percent_Identity=28.5714285714286, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=294, Percent_Identity=31.6326530612245, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI1788194, Length=358, Percent_Identity=29.608938547486, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1789453, Length=330, Percent_Identity=28.4848484848485, Blast_Score=115, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 60845; Mature: 60845

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLMYNLSMKMKMLLSAIVPAMLVAIVTLVIVINSQLSALEYEIQDYQTVLTDERKNNI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH
EDAATIAQSVVEDVVRRFGTGPEAQEAVRFALKEARFSNGSGYFFVFDENDHYIVHSLKP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
QLEGKDGGGLKDPNGIKITVRLHEQATRGGGFIEYIYDKPGSSVPQPKIAYAAPISGTGW
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCC
FLGTGLYIDDIAKATEVYRQEASERMETQISTIVITALALVALTCLIMSYVASRMIAPIK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMLNTFIDIANGEGDLTHRINVSGTDEIGQLGKAFNQFVGKLHNIITDVSKATNNVTTAT
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DQISSQTVHLSNQLQEHNHETEQVVTAVTEMSSTANEVAQSAHQVASATNEANNDAHNAQ
HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NLVQKSTQSIGSLEQNVVTTSQHMNSLHDQSKKIDGVLQVIGEIAEQTNLLALNAAIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH
RAGEQGRGFAVVADEVRNLASRTQGSTLEIKTMLDELHKLVEQAVSSMGESSNTCQDVVT
HCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
SSNDISAGLNDVSTAVASINAMTDHIATAATEQSSVTEEINRNLVTIRDIVSSLLISSET
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SSSAVDELKQAGGQLSQLVGQFKL
CHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MRLLMYNLSMKMKMLLSAIVPAMLVAIVTLVIVINSQLSALEYEIQDYQTVLTDERKNNI
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH
EDAATIAQSVVEDVVRRFGTGPEAQEAVRFALKEARFSNGSGYFFVFDENDHYIVHSLKP
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCC
QLEGKDGGGLKDPNGIKITVRLHEQATRGGGFIEYIYDKPGSSVPQPKIAYAAPISGTGW
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCC
FLGTGLYIDDIAKATEVYRQEASERMETQISTIVITALALVALTCLIMSYVASRMIAPIK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DMLNTFIDIANGEGDLTHRINVSGTDEIGQLGKAFNQFVGKLHNIITDVSKATNNVTTAT
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
DQISSQTVHLSNQLQEHNHETEQVVTAVTEMSSTANEVAQSAHQVASATNEANNDAHNAQ
HHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
NLVQKSTQSIGSLEQNVVTTSQHMNSLHDQSKKIDGVLQVIGEIAEQTNLLALNAAIEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHH
RAGEQGRGFAVVADEVRNLASRTQGSTLEIKTMLDELHKLVEQAVSSMGESSNTCQDVVT
HCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
SSNDISAGLNDVSTAVASINAMTDHIATAATEQSSVTEEINRNLVTIRDIVSSLLISSET
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SSSAVDELKQAGGQLSQLVGQFKL
CHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]