| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709506
Identifier: 218709506
GI number: 218709506
Start: 1649654
End: 1649818
Strand: Direct
Name: 218709506
Synonym: VS_1515
Alternate gene names: NA
Gene position: 1649654-1649818 (Clockwise)
Preceding gene: 218709505
Following gene: 218709508
Centisome position: 50.0
GC content: 37.58
Gene sequence:
>165_bases TTGATGCAGACGACGAACAAGTTTTCTAACACCTACTCTCTTGTCGAGTTGGCTCTACACCTCGATTTAAAGCTACACCT CGATTTTGAAGCTAGCCCAGAAAACACAAAAATAGAAAAAGAGCACTTAATGTGCTCTTTTTTAACATCTTCGATTTTTA CTTAG
Upstream 100 bases:
>100_bases AATGGGAGCCAAGATTTTTACGACGATTGTCCTGCATGTTGCAATGCAATTCATCTGGACATGCAGGTTGATGAATTGAG AGACAGAATCCATCTCTCGA
Downstream 100 bases:
>100_bases TCAACGCTTTTAGGGCAAGTGTTATTGATGAACCGCTACTACGACTTCTGGTTTGCTAGCACGCGCTCAACAGTATCAAC AATCGCTTGTGTTTGAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MMQTTNKFSNTYSLVELALHLDLKLHLDFEASPENTKIEKEHLMCSFLTSSIFT
Sequences:
>Translated_54_residues MMQTTNKFSNTYSLVELALHLDLKLHLDFEASPENTKIEKEHLMCSFLTSSIFT >Mature_54_residues MMQTTNKFSNTYSLVELALHLDLKLHLDFEASPENTKIEKEHLMCSFLTSSIFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6249; Mature: 6249
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQTTNKFSNTYSLVELALHLDLKLHLDFEASPENTKIEKEHLMCSFLTSSIFT CCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MMQTTNKFSNTYSLVELALHLDLKLHLDFEASPENTKIEKEHLMCSFLTSSIFT CCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA