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The map label for this gene is 218709500

Identifier: 218709500

GI number: 218709500

Start: 1643962

End: 1644765

Strand: Direct

Name: 218709500

Synonym: VS_1509

Alternate gene names: NA

Gene position: 1643962-1644765 (Clockwise)

Preceding gene: 218709497

Following gene: 218709502

Centisome position: 49.83

GC content: 45.27

Gene sequence:

>804_bases
ATGCAAGACCCATCCCTGCTTCGCCTTGTTTGTTTTATTGTCGTTTTTGGATTATGTGCGCTTTGGGAGTACCGCTTTCC
ACGTAAAACGCTGACTCAGAGTAAATGGTTTCGTTGGGGAAACAACTTTGCTTTAGTCGCTCTGAATAGCTTTCTGTTAG
CGACGTTAATCCCTATCGCGGCGTTCCAAGCGGCAGTTATCGCACAAGATAACCAATGGGGTTTGTTTAATACCCTGTCA
CTTCCCAAAGAACTCAGCATTGTGGTTTGTGTATTGTTGTTGGATTTCGCTATTTACCTACAGCACTTGGTGTTTCACCG
CGTTCCTTGGCTGTGGAAGCTGCACCGAGTTCATCACGCTGATCTCGATATCGATGTCACAACGGGCACCCGCTTTCACC
CAATAGAAATGATTCTTTCAATGCTGATTAAAGTGAGCTTGGTCATAGCACTGGGTGTTCCAGTGTTCGCTGTTGTCATC
TTCGAAATTGTGTTGAATGCCAGTGCCATGTTTAACCACAGTAATGCGCGCCTGCCGTTGTGGTTCGATAAACGATTAAG
AAAAGCGATCGTTACGCCAGACATGCATCGCGTCCATCACTCTGTCATTGTTAAAGAAACACACTCAAACTTTGGTTTCT
TCTTATCGGTGTGGGATATCTGGTTTAGGACATATCGTGACCAGCCTAAGCTTGGTCATGATAACGTTCATATCGGTGTA
CCAGAGATTCAAGATGGTAAAGAGCAACGGTTAGACTTAATGCTACGTCAGCCATTTGCACGATTCCCGACAACGAAAGA
CTAG

Upstream 100 bases:

>100_bases
AAACGGTGAAAAGCGTGGATTCTCATGGACAATAACGATAGATCTAGAAAAGTGGCACGATTGTACTTACAGTGACCCTA
GAATGATAGAAGGAATTCCC

Downstream 100 bases:

>100_bases
GTTCGAATTCAGTTGAGTCTCAAGTTTAAACTGAGGTCAAACCTATCTTAATAACAAACCCGTCTCCATAACAAACCAAG
CTTAATACCAAAGCAAAACG

Product: sterol desaturase

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase-Like Protein; Transmembrane Protein; Sterol Desaturase-Related Protein; C-5 Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase -Like Protein; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase-Like; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; Fatty Acid Hydroxylase Superfamily Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MQDPSLLRLVCFIVVFGLCALWEYRFPRKTLTQSKWFRWGNNFALVALNSFLLATLIPIAAFQAAVIAQDNQWGLFNTLS
LPKELSIVVCVLLLDFAIYLQHLVFHRVPWLWKLHRVHHADLDIDVTTGTRFHPIEMILSMLIKVSLVIALGVPVFAVVI
FEIVLNASAMFNHSNARLPLWFDKRLRKAIVTPDMHRVHHSVIVKETHSNFGFFLSVWDIWFRTYRDQPKLGHDNVHIGV
PEIQDGKEQRLDLMLRQPFARFPTTKD

Sequences:

>Translated_267_residues
MQDPSLLRLVCFIVVFGLCALWEYRFPRKTLTQSKWFRWGNNFALVALNSFLLATLIPIAAFQAAVIAQDNQWGLFNTLS
LPKELSIVVCVLLLDFAIYLQHLVFHRVPWLWKLHRVHHADLDIDVTTGTRFHPIEMILSMLIKVSLVIALGVPVFAVVI
FEIVLNASAMFNHSNARLPLWFDKRLRKAIVTPDMHRVHHSVIVKETHSNFGFFLSVWDIWFRTYRDQPKLGHDNVHIGV
PEIQDGKEQRLDLMLRQPFARFPTTKD
>Mature_267_residues
MQDPSLLRLVCFIVVFGLCALWEYRFPRKTLTQSKWFRWGNNFALVALNSFLLATLIPIAAFQAAVIAQDNQWGLFNTLS
LPKELSIVVCVLLLDFAIYLQHLVFHRVPWLWKLHRVHHADLDIDVTTGTRFHPIEMILSMLIKVSLVIALGVPVFAVVI
FEIVLNASAMFNHSNARLPLWFDKRLRKAIVTPDMHRVHHSVIVKETHSNFGFFLSVWDIWFRTYRDQPKLGHDNVHIGV
PEIQDGKEQRLDLMLRQPFARFPTTKD

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31002; Mature: 31002

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPSLLRLVCFIVVFGLCALWEYRFPRKTLTQSKWFRWGNNFALVALNSFLLATLIPIA
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
AFQAAVIAQDNQWGLFNTLSLPKELSIVVCVLLLDFAIYLQHLVFHRVPWLWKLHRVHHA
HHHHHHEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
DLDIDVTTGTRFHPIEMILSMLIKVSLVIALGVPVFAVVIFEIVLNASAMFNHSNARLPL
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
WFDKRLRKAIVTPDMHRVHHSVIVKETHSNFGFFLSVWDIWFRTYRDQPKLGHDNVHIGV
HHHHHHHHHHCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECC
PEIQDGKEQRLDLMLRQPFARFPTTKD
CCCCCCHHHHHHHHHHCHHHCCCCCCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA