Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709490

Identifier: 218709490

GI number: 218709490

Start: 1634296

End: 1635102

Strand: Direct

Name: 218709490

Synonym: VS_1499

Alternate gene names: NA

Gene position: 1634296-1635102 (Clockwise)

Preceding gene: 218709487

Following gene: 218709491

Centisome position: 49.53

GC content: 45.6

Gene sequence:

>807_bases
ATGAAAGCAATTCCCCTAACTATTGCAGCTCTATCTATCGTCAGTTACACGGCTAGCAGCGCGGAAGACACCACTCATAT
CAAATTGGCGACAACCACAAGTACCTACCACTCAGGCTTACTGGACTACTTATTGCCTGAGTTCGAAAAGGATTCTGGTA
TTAAGGTTGATGTTCTCGCTGCGGGTACGGGTAAATCACTTCGCATGGGTGAAAACGGTGACGTTGATTTGGTAATGACT
CACGCACCAAAGGCTGAAGCCAACTTCGTTGAAAAAGGTTACGGCGTTTTACCTCGTAAGCTGATGTACAACGATTTTGT
TATCGTTGGCCCACAAAGCGACCCTGCGAAGATTAAATCTCAAAAAGCAGTAGCTGATGTGTTCAAAGCAATCGCGAACA
ACAACGTGACGTTTGTTTCTCGTGGAGACGACTCTGGTACTCATAAGAAAGAGATGGGTATTTGGGCGCAAACTAAGATG
GAGCCAAACTTCGGCGGCTATCGCAGTGTTGGTCAAGGAATGGGCCCAACTCTGAACATGGCGTCTGAAATGCAAGGCTA
CACCATGACAGACCGTGGTACTTGGTTGGCTTACCAAAACAAACTTGACCTTAAAGTGTTGTTCCAAGGCGACAAGAACC
TATTTAACCCTTACCAAGTGATTCTTGTTAACCCAGAACGCTACCCAAGCATCAATTACCAAGCAGCGAAAGTATTCAGT
GATTGGTTGGTTAACCCTAAAGGCCAGAAACTGATCAACGACTTTAAACTGCACGGCAAACAGCTGTTTGTTGCAAACGC
AGAATAG

Upstream 100 bases:

>100_bases
TCCTAATTACAACAATTAGCGTCTTATGCACATGCCCTTGTTTGAGCCCTTTAAAAATAGAGGCATGTCATTCATTTATA
ACAGAATGGACATAATAATA

Downstream 100 bases:

>100_bases
TTGGTTGCAAGCGCAGAATAGCTTGTTGTAAGAAATGAGTCGTGGGTTGTGAGTAAAGCGTAGCGTTGAAGGTTTAACCC
TAACCAACTAGCGCTACGCT

Product: ABC transporter

Products: NA

Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKAIPLTIAALSIVSYTASSAEDTTHIKLATTTSTYHSGLLDYLLPEFEKDSGIKVDVLAAGTGKSLRMGENGDVDLVMT
HAPKAEANFVEKGYGVLPRKLMYNDFVIVGPQSDPAKIKSQKAVADVFKAIANNNVTFVSRGDDSGTHKKEMGIWAQTKM
EPNFGGYRSVGQGMGPTLNMASEMQGYTMTDRGTWLAYQNKLDLKVLFQGDKNLFNPYQVILVNPERYPSINYQAAKVFS
DWLVNPKGQKLINDFKLHGKQLFVANAE

Sequences:

>Translated_268_residues
MKAIPLTIAALSIVSYTASSAEDTTHIKLATTTSTYHSGLLDYLLPEFEKDSGIKVDVLAAGTGKSLRMGENGDVDLVMT
HAPKAEANFVEKGYGVLPRKLMYNDFVIVGPQSDPAKIKSQKAVADVFKAIANNNVTFVSRGDDSGTHKKEMGIWAQTKM
EPNFGGYRSVGQGMGPTLNMASEMQGYTMTDRGTWLAYQNKLDLKVLFQGDKNLFNPYQVILVNPERYPSINYQAAKVFS
DWLVNPKGQKLINDFKLHGKQLFVANAE
>Mature_268_residues
MKAIPLTIAALSIVSYTASSAEDTTHIKLATTTSTYHSGLLDYLLPEFEKDSGIKVDVLAAGTGKSLRMGENGDVDLVMT
HAPKAEANFVEKGYGVLPRKLMYNDFVIVGPQSDPAKIKSQKAVADVFKAIANNNVTFVSRGDDSGTHKKEMGIWAQTKM
EPNFGGYRSVGQGMGPTLNMASEMQGYTMTDRGTWLAYQNKLDLKVLFQGDKNLFNPYQVILVNPERYPSINYQAAKVFS
DWLVNPKGQKLINDFKLHGKQLFVANAE

Specific function: Unknown

COG id: COG2998

COG function: function code H; ABC-type tungstate transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29481; Mature: 29481

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIPLTIAALSIVSYTASSAEDTTHIKLATTTSTYHSGLLDYLLPEFEKDSGIKVDVLA
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEE
AGTGKSLRMGENGDVDLVMTHAPKAEANFVEKGYGVLPRKLMYNDFVIVGPQSDPAKIKS
ECCCCEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCHHEECCCEEEECCCCCCHHHHH
QKAVADVFKAIANNNVTFVSRGDDSGTHKKEMGIWAQTKMEPNFGGYRSVGQGMGPTLNM
HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCH
ASEMQGYTMTDRGTWLAYQNKLDLKVLFQGDKNLFNPYQVILVNPERYPSINYQAAKVFS
HHHCCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
DWLVNPKGQKLINDFKLHGKQLFVANAE
HHCCCCCCHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MKAIPLTIAALSIVSYTASSAEDTTHIKLATTTSTYHSGLLDYLLPEFEKDSGIKVDVLA
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEEEE
AGTGKSLRMGENGDVDLVMTHAPKAEANFVEKGYGVLPRKLMYNDFVIVGPQSDPAKIKS
ECCCCEEEECCCCCEEEEEECCCCCCHHHHHCCCCCCCHHEECCCEEEECCCCCCHHHHH
QKAVADVFKAIANNNVTFVSRGDDSGTHKKEMGIWAQTKMEPNFGGYRSVGQGMGPTLNM
HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCH
ASEMQGYTMTDRGTWLAYQNKLDLKVLFQGDKNLFNPYQVILVNPERYPSINYQAAKVFS
HHHCCCCEEECCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHH
DWLVNPKGQKLINDFKLHGKQLFVANAE
HHCCCCCCHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA