Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218709454

Identifier: 218709454

GI number: 218709454

Start: 1595865

End: 1596344

Strand: Direct

Name: 218709454

Synonym: VS_1463

Alternate gene names: NA

Gene position: 1595865-1596344 (Clockwise)

Preceding gene: 218709453

Following gene: 218709455

Centisome position: 48.37

GC content: 41.46

Gene sequence:

>480_bases
ATGGTAAAGCCTTGGTATAAACAGTTTTGGCCGTGGTTCTTAATCGCGTTGCCAGCGACAGTAGTTATTTGGACCATCAT
GACGGTTATTGTGTTCACACAGAACTCTGTAGACCTAGTGACTGAGGATTACTATAAAAAAGGAAAAGGCATTAATGTCG
ACATTTCAAAAGTAAATATTGCAAAGGAACTCGGCCTTTCAGCTTCAGTTAACGAGAAAGGTAACTCAGTTATCATTACT
CTTGAGAAAGGTAAACTCGATCACTTCCCTGCGATTAACGCAATGTTTGTTCACAGAACACTGCCTGACCGCGATTTTAC
TCAACTACTGACAGCGGATGCGAAAGGCAACTACACCATGACTTTGGATCACGAAATGCAAGGACCATGGTTTATTGAGC
TTTCTCCGCATGATTCTGAATGGTTAGTGCAAGGTCGCATGAACTTCCCTATTGATACTCCTACTCAACTAACGAATTAA

Upstream 100 bases:

>100_bases
TCGGATAATAAGTAACATTTCAATAACAGCCTCTTTCTAAGAGGCTGTCTTTCCTTTATTTTATAACCCCTTCTTTTTAT
TCTTTTTTGAGATCTTTTTT

Downstream 100 bases:

>100_bases
AGCTTATGTGTGAATCCTGTTATCACTGCGGTGAAGATGTACCAGCGGAAACGGATTTTAAAGTGGAAATTTTAGGATCG
GTTCGTCCGATGTGTTGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MVKPWYKQFWPWFLIALPATVVIWTIMTVIVFTQNSVDLVTEDYYKKGKGINVDISKVNIAKELGLSASVNEKGNSVIIT
LEKGKLDHFPAINAMFVHRTLPDRDFTQLLTADAKGNYTMTLDHEMQGPWFIELSPHDSEWLVQGRMNFPIDTPTQLTN

Sequences:

>Translated_159_residues
MVKPWYKQFWPWFLIALPATVVIWTIMTVIVFTQNSVDLVTEDYYKKGKGINVDISKVNIAKELGLSASVNEKGNSVIIT
LEKGKLDHFPAINAMFVHRTLPDRDFTQLLTADAKGNYTMTLDHEMQGPWFIELSPHDSEWLVQGRMNFPIDTPTQLTN
>Mature_159_residues
MVKPWYKQFWPWFLIALPATVVIWTIMTVIVFTQNSVDLVTEDYYKKGKGINVDISKVNIAKELGLSASVNEKGNSVIIT
LEKGKLDHFPAINAMFVHRTLPDRDFTQLLTADAKGNYTMTLDHEMQGPWFIELSPHDSEWLVQGRMNFPIDTPTQLTN

Specific function: Unknown

COG id: COG3198

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18185; Mature: 18185

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPWYKQFWPWFLIALPATVVIWTIMTVIVFTQNSVDLVTEDYYKKGKGINVDISKVNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCEEEEHHEEH
AKELGLSASVNEKGNSVIITLEKGKLDHFPAINAMFVHRTLPDRDFTQLLTADAKGNYTM
HHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEE
TLDHEMQGPWFIELSPHDSEWLVQGRMNFPIDTPTQLTN
EEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKPWYKQFWPWFLIALPATVVIWTIMTVIVFTQNSVDLVTEDYYKKGKGINVDISKVNI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCEEEEHHEEH
AKELGLSASVNEKGNSVIITLEKGKLDHFPAINAMFVHRTLPDRDFTQLLTADAKGNYTM
HHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCEEE
TLDHEMQGPWFIELSPHDSEWLVQGRMNFPIDTPTQLTN
EEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA