Click here to switch to the map view.

The map label for this gene is 218709449

Identifier: 218709449

GI number: 218709449

Start: 1591936

End: 1592301

Strand: Reverse

Name: 218709449

Synonym: VS_1458

Alternate gene names: NA

Gene position: 1592301-1591936 (Counterclockwise)

Preceding gene: 218709460

Following gene: 218709448

Centisome position: 48.26

GC content: 36.07

Gene sequence:

>366_bases
ATGGCGGCACAAAAGCTAACAAAAGGCAGGCTTGTTCAAATTATCGTCATGTTGGTTATTTTAATAGCTGCATTTACTTG
GAGAACAGTGACATACGACAATGACGAAACAGTAAACTGTATAATTTCTAAACCTTGCCAAATTACTATTGATAAACATA
ATGTTTTAATTTCGGGTGATAACCTAGGGTATTCGATCGAAACATCTAAAACTGGTAAATTTATCATTAACTATAATGAG
AGCGGAACTCTAGAAGAAAAAGGGGCATCAATTTGGCTGTTACGAACGAACGCTCAGAACTCCTCAATAACGGTTACATT
TCCACAACAGGTAGCCACACTTTCTGTAAACCTTTCTAAGGAATAA

Upstream 100 bases:

>100_bases
GAATTAACAAATCAATGACAGAGTAGTAACCTTACGCTTGGTCTGGAATTGGATTTTTATTTAAAAACTTTGAACTTTGT
AACAAGGAGTAAAGATTATA

Downstream 100 bases:

>100_bases
CACAGTAACAAGTTAGTCTCACCTCAATTCTTTTGATAGAAATATGTACTAAGTCAGTGAAATAGATTGTATAAAAGTGT
TATAAAGAGAGCATTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MAAQKLTKGRLVQIIVMLVILIAAFTWRTVTYDNDETVNCIISKPCQITIDKHNVLISGDNLGYSIETSKTGKFIINYNE
SGTLEEKGASIWLLRTNAQNSSITVTFPQQVATLSVNLSKE

Sequences:

>Translated_121_residues
MAAQKLTKGRLVQIIVMLVILIAAFTWRTVTYDNDETVNCIISKPCQITIDKHNVLISGDNLGYSIETSKTGKFIINYNE
SGTLEEKGASIWLLRTNAQNSSITVTFPQQVATLSVNLSKE
>Mature_120_residues
AAQKLTKGRLVQIIVMLVILIAAFTWRTVTYDNDETVNCIISKPCQITIDKHNVLISGDNLGYSIETSKTGKFIINYNES
GTLEEKGASIWLLRTNAQNSSITVTFPQQVATLSVNLSKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13393; Mature: 13261

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQKLTKGRLVQIIVMLVILIAAFTWRTVTYDNDETVNCIISKPCQITIDKHNVLISGD
CCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCEEEEEECCEEEEECC
NLGYSIETSKTGKFIINYNESGTLEEKGASIWLLRTNAQNSSITVTFPQQVATLSVNLSK
CCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEEEEC
E
C
>Mature Secondary Structure 
AAQKLTKGRLVQIIVMLVILIAAFTWRTVTYDNDETVNCIISKPCQITIDKHNVLISGD
CCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCEEEEEECCEEEEECC
NLGYSIETSKTGKFIINYNESGTLEEKGASIWLLRTNAQNSSITVTFPQQVATLSVNLSK
CCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEEEEEC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA