Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709448

Identifier: 218709448

GI number: 218709448

Start: 1590636

End: 1591820

Strand: Reverse

Name: 218709448

Synonym: VS_1457

Alternate gene names: NA

Gene position: 1591820-1590636 (Counterclockwise)

Preceding gene: 218709449

Following gene: 218709447

Centisome position: 48.25

GC content: 43.88

Gene sequence:

>1185_bases
ATGAAATTTCTATCAAAAGTCTCTTATTCCCTAGACGATAAAATCGCAGTAGATGAGCTGCTCAGTGGGGTGGCAAACCC
TGACGATATTGCCTGTCTTATCTGCTACTGCACCGAAGAGTACTCCACACTTGCTGTGCAGAGATATTTGGTAGATGCGC
TCCCGAATACACCAATACATGGCTGCACCACTTGTCACGGTATTATGACCGAAACAGGGTTCCATTCAGGCCCTGTGATT
GGGATACTCATCATCTATGATTCCGGGATCAATGCCTACGGTACCGGCATCAGTCACTTTGGCGATTCCATAGACCGTAG
TACATTCAGCGCCATCGATAAAGCATTAAAGAACGCCAACCGAGAAGGTGAAATACCCGATCTTATCTTGCTCCATTCCA
CCCCAGGAAATGAAGAGAAGGTGATGGCGGCCATCGATAACAAATTTGGCACAGAGGTGCCGATTATTGGTGGAAGCGCA
GCAGACAATCAAGTGTCTGGAAATTGGAGTATCTTTACCGAAGAAGCTCTTGCTATTAATGGCGTCTCTTTAACGGTGTT
TTTTGCGTCACAATCCATCTATTCATCTTTTAGCGCCGGTCATACACCCACTCAGTATTCAGGCACCGTCACCAAAGTAA
GAAATCGAATATTGTTAGAGATCGACCATAGGCCTGCGACCACCGTTTATAATGAATGGACTAATTTTCATTTAGGTGGC
AGTGATGATGGGTATATTTTTGAAAAGTCGACAGTTTATCCATTAGGTCGAAAGGTCGGTTCTTCTTACGACTACCCATA
TTTCAAGTTGTCGCATTCGATCAGAGAAACTGAGTGTAACGGTATCGAGTTGTTCACTGATATCAATGAAGGTGACACCA
TCTATTTGATGCAAGGCTCTAAGCAACAACTTATCAGCCGTGCCGCTAACATCATTCATTCGTCTTACTATAATGATATG
GATCTTGAAGAAAAATTAGGGGCGATCAACATATTCTGTGCAGGACCAATGCTGCACCTAAAACAAGATATGGATGAGGT
TTGTGACCAAATCAATCACGCACTTGGTGGGCTTCCATACATATGTCCATTTACGTTTGGTGAGCAAGGCAGACTCTCTG
GTGGTGAGAATGCGCACGGAAATTTGATGGTATCGTCTGCAACGTTTTATAGGCTGAAAAAGTAA

Upstream 100 bases:

>100_bases
GTCTCACCTCAATTCTTTTGATAGAAATATGTACTAAGTCAGTGAAATAGATTGTATAAAAGTGTTATAAAGAGAGCATT
AATAAAATCTTCCGAGATCT

Downstream 100 bases:

>100_bases
TGGATACTGAAGACCAAGAAGCGCTGCAAGAAGCTCGTATTGAACTCCAAAAACTAAAGGTCCGTGAACGTAAATTAGCT
GAAGAGAATAGGGTGATCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKFLSKVSYSLDDKIAVDELLSGVANPDDIACLICYCTEEYSTLAVQRYLVDALPNTPIHGCTTCHGIMTETGFHSGPVI
GILIIYDSGINAYGTGISHFGDSIDRSTFSAIDKALKNANREGEIPDLILLHSTPGNEEKVMAAIDNKFGTEVPIIGGSA
ADNQVSGNWSIFTEEALAINGVSLTVFFASQSIYSSFSAGHTPTQYSGTVTKVRNRILLEIDHRPATTVYNEWTNFHLGG
SDDGYIFEKSTVYPLGRKVGSSYDYPYFKLSHSIRETECNGIELFTDINEGDTIYLMQGSKQQLISRAANIIHSSYYNDM
DLEEKLGAINIFCAGPMLHLKQDMDEVCDQINHALGGLPYICPFTFGEQGRLSGGENAHGNLMVSSATFYRLKK

Sequences:

>Translated_394_residues
MKFLSKVSYSLDDKIAVDELLSGVANPDDIACLICYCTEEYSTLAVQRYLVDALPNTPIHGCTTCHGIMTETGFHSGPVI
GILIIYDSGINAYGTGISHFGDSIDRSTFSAIDKALKNANREGEIPDLILLHSTPGNEEKVMAAIDNKFGTEVPIIGGSA
ADNQVSGNWSIFTEEALAINGVSLTVFFASQSIYSSFSAGHTPTQYSGTVTKVRNRILLEIDHRPATTVYNEWTNFHLGG
SDDGYIFEKSTVYPLGRKVGSSYDYPYFKLSHSIRETECNGIELFTDINEGDTIYLMQGSKQQLISRAANIIHSSYYNDM
DLEEKLGAINIFCAGPMLHLKQDMDEVCDQINHALGGLPYICPFTFGEQGRLSGGENAHGNLMVSSATFYRLKK
>Mature_394_residues
MKFLSKVSYSLDDKIAVDELLSGVANPDDIACLICYCTEEYSTLAVQRYLVDALPNTPIHGCTTCHGIMTETGFHSGPVI
GILIIYDSGINAYGTGISHFGDSIDRSTFSAIDKALKNANREGEIPDLILLHSTPGNEEKVMAAIDNKFGTEVPIIGGSA
ADNQVSGNWSIFTEEALAINGVSLTVFFASQSIYSSFSAGHTPTQYSGTVTKVRNRILLEIDHRPATTVYNEWTNFHLGG
SDDGYIFEKSTVYPLGRKVGSSYDYPYFKLSHSIRETECNGIELFTDINEGDTIYLMQGSKQQLISRAANIIHSSYYNDM
DLEEKLGAINIFCAGPMLHLKQDMDEVCDQINHALGGLPYICPFTFGEQGRLSGGENAHGNLMVSSATFYRLKK

Specific function: Unknown

COG id: COG3287

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43165; Mature: 43165

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLSKVSYSLDDKIAVDELLSGVANPDDIACLICYCTEEYSTLAVQRYLVDALPNTPIH
CCCHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCC
GCTTCHGIMTETGFHSGPVIGILIIYDSGINAYGTGISHFGDSIDRSTFSAIDKALKNAN
CCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCC
REGEIPDLILLHSTPGNEEKVMAAIDNKFGTEVPIIGGSAADNQVSGNWSIFTEEALAIN
CCCCCCCEEEEECCCCCCHHEEEEECCCCCCCCCEECCCCCCCCCCCCEEEEECCEEEEC
GVSLTVFFASQSIYSSFSAGHTPTQYSGTVTKVRNRILLEIDHRPATTVYNEWTNFHLGG
CEEEEEEEECHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHCCCEEECCC
SDDGYIFEKSTVYPLGRKVGSSYDYPYFKLSHSIRETECNGIELFTDINEGDTIYLMQGS
CCCCEEEECCCCCHHHHHHCCCCCCCCEEECCCHHHCCCCCEEEEEECCCCCEEEEEECC
KQQLISRAANIIHSSYYNDMDLEEKLGAINIFCAGPMLHLKQDMDEVCDQINHALGGLPY
HHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCE
ICPFTFGEQGRLSGGENAHGNLMVSSATFYRLKK
EEEECCCCCCCCCCCCCCCCCEEEECEEEEEECC
>Mature Secondary Structure
MKFLSKVSYSLDDKIAVDELLSGVANPDDIACLICYCTEEYSTLAVQRYLVDALPNTPIH
CCCHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCC
GCTTCHGIMTETGFHSGPVIGILIIYDSGINAYGTGISHFGDSIDRSTFSAIDKALKNAN
CCHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCC
REGEIPDLILLHSTPGNEEKVMAAIDNKFGTEVPIIGGSAADNQVSGNWSIFTEEALAIN
CCCCCCCEEEEECCCCCCHHEEEEECCCCCCCCCEECCCCCCCCCCCCEEEEECCEEEEC
GVSLTVFFASQSIYSSFSAGHTPTQYSGTVTKVRNRILLEIDHRPATTVYNEWTNFHLGG
CEEEEEEEECHHHHHHHCCCCCCCCCCCHHHHHCCEEEEEECCCCCCHHHHCCCEEECCC
SDDGYIFEKSTVYPLGRKVGSSYDYPYFKLSHSIRETECNGIELFTDINEGDTIYLMQGS
CCCCEEEECCCCCHHHHHHCCCCCCCCEEECCCHHHCCCCCEEEEEECCCCCEEEEEECC
KQQLISRAANIIHSSYYNDMDLEEKLGAINIFCAGPMLHLKQDMDEVCDQINHALGGLPY
HHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCE
ICPFTFGEQGRLSGGENAHGNLMVSSATFYRLKK
EEEECCCCCCCCCCCCCCCCCEEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA