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The map label for this gene is 218709446

Identifier: 218709446

GI number: 218709446

Start: 1587283

End: 1588665

Strand: Reverse

Name: 218709446

Synonym: VS_1455

Alternate gene names: NA

Gene position: 1588665-1587283 (Counterclockwise)

Preceding gene: 218709447

Following gene: 218709441

Centisome position: 48.15

GC content: 47.51

Gene sequence:

>1383_bases
TTGGTCTGCTTAGGAGTTATCTGGATGCTTATTACTATGAGTGAAAAAGATATTCATCGATTCAAGGTTCTGACTGACGT
ACGTGAAAAACGACTACGCCAAGTTGACGCTGCTATCATTTTGAACCTGTCTGCGCGTCATATCCGACGTTTGGTAAACA
AACTTGTCTCTCTTGGCGCGCAAAGTCTTACACACGCAGCGCGTGGACGCCCAAGTAATCGACGCTACTCAGAACATTTC
AGAATTGAAATACTGAAACTTATCCGTGAGCATTACTCTGACTTCTCACCAACGTTCGCTCTGGAAAAACTGACTGAACT
GCACAATCTATCAGTCTCTAAAGAAACACTGCGTCAATGGATGATCGCCGACGGACTGTGGCTTCCACATGCGAAACGAA
AACCTCGGATCTATCAGCCTCGTTACCGTCGTGATTGCTTGGGTGAACTTATTCAAATTGACGGCTCCCATCATGACTGG
TTTGAAGGCCGCAGCGACAAATGCTGCCTATTGGTGTTCATTGACGATGCGACTGGCCGCTTGATGAACCTAAGATTCAG
CGAAACGGAATCCGCGTTTGACTACATGTTGGCGACGCGTGAATACCTCAATGAGCACGGTAAACCCATCGCATTTTACA
GCGACAAACACTCCATATTTCGAGTGAATCAGGAGAAACACAAACAAGTTGGCCAAACCCAATACGGGCGCGTGCTGAAA
GAGCTGGCGATAGAACTCATTTGTGCCAACAGCTCCCAAGCCAAAGGCCGTGTTGAGCGAGCCAATCTCACGTTGCAAGA
CCGGCTGGTTAAAGAGATGCGCTTACAAGGCATCAACACCATCGAGCAAGCCAACGCCTGGCTTCCCTACTTCATCGCCG
ATTTTAACCACCGCTTTGCTAAGCCCGCTCAATACCCGAAAAACATGCATCGTCCGGTTCGAGAATCCAAGCAAGAACTC
GACGATATTTTCAGTTGGCAAGAAAGCCGCAAGCTCTCAAAATCACTGACATTTCAATACGATAAAGTAATTTATCTCAT
TGAGCCCACCGAAGAAAACAGCCGATTAATGCACGAAACCGTGAAGGTACTCGACTACCCAAATGGAGAAATCGCCATTC
AGTACGGGCATCGAAAACTCGAATTCAAAACCTTCGACAAACTCGAGCACGTTCAACAAACCCAAATCGTCGACAACAAA
CGCCTCGGCCAAGTTTTAAAATTTGCTCAGCAACAACAAGAAGAATTCGAACAACAACAGCAACGAACCCGCAGTAAGAA
AGCCCCCAAGCGCCGTGCACAACAAAGAGCCCTACAAACCGCGCCTCGAGCCATCAACCCTGTCCTCATCGAACCATTCA
AAGCCTCCAGTCGAAAGACCTAA

Upstream 100 bases:

>100_bases
CAATTTAACATAATATACATAATGCGCACTGAATTTGTTAGAGCAATTTAGTAATGTCCGGTTTGAGCCATTTTAAAATG
TCCTCCTAAGCTTACCTATA

Downstream 100 bases:

>100_bases
CAACGGGACATTTCTATTTGGGGCAAATGAGGACATTTTAAAATGGGATTGACATGGGCTAGTTTGTTTTTGAGGGGCTT
TCTGGGCTCATACAGAGATT

Product: putative integrase/transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MVCLGVIWMLITMSEKDIHRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGAQSLTHAARGRPSNRRYSEHF
RIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQWMIADGLWLPHAKRKPRIYQPRYRRDCLGELIQIDGSHHDW
FEGRSDKCCLLVFIDDATGRLMNLRFSETESAFDYMLATREYLNEHGKPIAFYSDKHSIFRVNQEKHKQVGQTQYGRVLK
ELAIELICANSSQAKGRVERANLTLQDRLVKEMRLQGINTIEQANAWLPYFIADFNHRFAKPAQYPKNMHRPVRESKQEL
DDIFSWQESRKLSKSLTFQYDKVIYLIEPTEENSRLMHETVKVLDYPNGEIAIQYGHRKLEFKTFDKLEHVQQTQIVDNK
RLGQVLKFAQQQQEEFEQQQQRTRSKKAPKRRAQQRALQTAPRAINPVLIEPFKASSRKT

Sequences:

>Translated_460_residues
MVCLGVIWMLITMSEKDIHRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGAQSLTHAARGRPSNRRYSEHF
RIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQWMIADGLWLPHAKRKPRIYQPRYRRDCLGELIQIDGSHHDW
FEGRSDKCCLLVFIDDATGRLMNLRFSETESAFDYMLATREYLNEHGKPIAFYSDKHSIFRVNQEKHKQVGQTQYGRVLK
ELAIELICANSSQAKGRVERANLTLQDRLVKEMRLQGINTIEQANAWLPYFIADFNHRFAKPAQYPKNMHRPVRESKQEL
DDIFSWQESRKLSKSLTFQYDKVIYLIEPTEENSRLMHETVKVLDYPNGEIAIQYGHRKLEFKTFDKLEHVQQTQIVDNK
RLGQVLKFAQQQQEEFEQQQQRTRSKKAPKRRAQQRALQTAPRAINPVLIEPFKASSRKT
>Mature_460_residues
MVCLGVIWMLITMSEKDIHRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGAQSLTHAARGRPSNRRYSEHF
RIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQWMIADGLWLPHAKRKPRIYQPRYRRDCLGELIQIDGSHHDW
FEGRSDKCCLLVFIDDATGRLMNLRFSETESAFDYMLATREYLNEHGKPIAFYSDKHSIFRVNQEKHKQVGQTQYGRVLK
ELAIELICANSSQAKGRVERANLTLQDRLVKEMRLQGINTIEQANAWLPYFIADFNHRFAKPAQYPKNMHRPVRESKQEL
DDIFSWQESRKLSKSLTFQYDKVIYLIEPTEENSRLMHETVKVLDYPNGEIAIQYGHRKLEFKTFDKLEHVQQTQIVDNK
RLGQVLKFAQQQQEEFEQQQQRTRSKKAPKRRAQQRALQTAPRAINPVLIEPFKASSRKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 54194; Mature: 54194

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCLGVIWMLITMSEKDIHRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGA
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCH
QSLTHAARGRPSNRRYSEHFRIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
MIADGLWLPHAKRKPRIYQPRYRRDCLGELIQIDGSHHDWFEGRSDKCCLLVFIDDATGR
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCC
LMNLRFSETESAFDYMLATREYLNEHGKPIAFYSDKHSIFRVNQEKHKQVGQTQYGRVLK
EEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHHHCHHHHHHHHH
ELAIELICANSSQAKGRVERANLTLQDRLVKEMRLQGINTIEQANAWLPYFIADFNHRFA
HHHHHHHCCCCCHHCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHC
KPAQYPKNMHRPVRESKQELDDIFSWQESRKLSKSLTFQYDKVIYLIEPTEENSRLMHET
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEECEEEEEEECCCCCHHHHHHH
VKVLDYPNGEIAIQYGHRKLEFKTFDKLEHVQQTQIVDNKRLGQVLKFAQQQQEEFEQQQ
HHHHCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTRSKKAPKRRAQQRALQTAPRAINPVLIEPFKASSRKT
HHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MVCLGVIWMLITMSEKDIHRFKVLTDVREKRLRQVDAAIILNLSARHIRRLVNKLVSLGA
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCH
QSLTHAARGRPSNRRYSEHFRIEILKLIREHYSDFSPTFALEKLTELHNLSVSKETLRQW
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
MIADGLWLPHAKRKPRIYQPRYRRDCLGELIQIDGSHHDWFEGRSDKCCLLVFIDDATGR
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCC
LMNLRFSETESAFDYMLATREYLNEHGKPIAFYSDKHSIFRVNQEKHKQVGQTQYGRVLK
EEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHHHCHHHHHHHHH
ELAIELICANSSQAKGRVERANLTLQDRLVKEMRLQGINTIEQANAWLPYFIADFNHRFA
HHHHHHHCCCCCHHCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHC
KPAQYPKNMHRPVRESKQELDDIFSWQESRKLSKSLTFQYDKVIYLIEPTEENSRLMHET
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEECEEEEEEECCCCCHHHHHHH
VKVLDYPNGEIAIQYGHRKLEFKTFDKLEHVQQTQIVDNKRLGQVLKFAQQQQEEFEQQQ
HHHHCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRTRSKKAPKRRAQQRALQTAPRAINPVLIEPFKASSRKT
HHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]