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The map label for this gene is 218709441

Identifier: 218709441

GI number: 218709441

Start: 1584836

End: 1585264

Strand: Reverse

Name: 218709441

Synonym: VS_1450

Alternate gene names: NA

Gene position: 1585264-1584836 (Counterclockwise)

Preceding gene: 218709446

Following gene: 218709440

Centisome position: 48.05

GC content: 37.3

Gene sequence:

>429_bases
ATGGTTTATAAAAGTGGGTGTATAGTTACATTAATATGTACCATTAAAGGAATTATGATGATTGGTTCTGTACTTAAAGA
AGCTAGAGCGTTAAAAAACCTATCCCAACCAGAAGTGGCTCGTTTAGTCGGAGTGACTAAGCAGACTTATTTGAAGTGGG
AGAATGATACGACTGAACCTAAAGCAACCCAGATAAGTAAGCTTGCTAAAGTGTTGGGTATTACTTCTGATGAGATTTGT
AACGGTAAATTAGATAGTAAAATGGCGCTCAACTCGTTCATCATAAACATGTCTAAAGTTGGAGCTGATTCTGGGATGGT
TGCATTGAGAGTCTGGGAACAAGTTCCTGATCACCAATACTTTTTGAAGAGTTTATTAGACAGCGAAGATGTCGATGCTG
AAGGTAATGAGGTTCTTAATATCTTATAG

Upstream 100 bases:

>100_bases
GATAAATAAGCGGTCAATGAAGTACAAGTAAAATCCTGTCAATAGCAACTAAGGTACATTTTTATATACCATAAAGGTTA
TTTTTGGTTACCGCAAGGTT

Downstream 100 bases:

>100_bases
CGGATTCCGGTATTCCGGAGTTAGTTCGGGTGTAACAGGAACCCGAACCTGAGAGAGCCAGTTTTGCGCGCTACGCTTGC
CTCCCAAAATCTGCCTCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MVYKSGCIVTLICTIKGIMMIGSVLKEARALKNLSQPEVARLVGVTKQTYLKWENDTTEPKATQISKLAKVLGITSDEIC
NGKLDSKMALNSFIINMSKVGADSGMVALRVWEQVPDHQYFLKSLLDSEDVDAEGNEVLNIL

Sequences:

>Translated_142_residues
MVYKSGCIVTLICTIKGIMMIGSVLKEARALKNLSQPEVARLVGVTKQTYLKWENDTTEPKATQISKLAKVLGITSDEIC
NGKLDSKMALNSFIINMSKVGADSGMVALRVWEQVPDHQYFLKSLLDSEDVDAEGNEVLNIL
>Mature_142_residues
MVYKSGCIVTLICTIKGIMMIGSVLKEARALKNLSQPEVARLVGVTKQTYLKWENDTTEPKATQISKLAKVLGITSDEIC
NGKLDSKMALNSFIINMSKVGADSGMVALRVWEQVPDHQYFLKSLLDSEDVDAEGNEVLNIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15620; Mature: 15620

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYKSGCIVTLICTIKGIMMIGSVLKEARALKNLSQPEVARLVGVTKQTYLKWENDTTEP
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCC
KATQISKLAKVLGITSDEICNGKLDSKMALNSFIINMSKVGADSGMVALRVWEQVPDHQY
HHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
FLKSLLDSEDVDAEGNEVLNIL
HHHHHCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MVYKSGCIVTLICTIKGIMMIGSVLKEARALKNLSQPEVARLVGVTKQTYLKWENDTTEP
CEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCC
KATQISKLAKVLGITSDEICNGKLDSKMALNSFIINMSKVGADSGMVALRVWEQVPDHQY
HHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
FLKSLLDSEDVDAEGNEVLNIL
HHHHHCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA