Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is ycbG [C]

Identifier: 218709422

GI number: 218709422

Start: 1573913

End: 1574368

Strand: Direct

Name: ycbG [C]

Synonym: VS_1431

Alternate gene names: 218709422

Gene position: 1573913-1574368 (Clockwise)

Preceding gene: 218709419

Following gene: 218709423

Centisome position: 47.7

GC content: 42.11

Gene sequence:

>456_bases
ATGAAATATCAGCAACTTGAAAACTTGGAATGTGGTTGGAAATGGAACTATCTGGTCAAAAAATGGAAAGAAGGCGAGTC
GATCACCTGCCATATTGATTCAAGTGAAGCTGACGTTGCTGTACAAGCCTTATTGAAGCTTGAACACCAACCAACAGGTG
TTCTTGAGTGGATATCTGACAACATGTCTCCTGAGCTCGATAACAAGCTTAAGCAAGCGATCCGAGCTAAGCGAAAGCGT
CACTTTAATGCTGAACAAGTTCACACCAAGAAAAAATCAATCGACCTTGATTATCGTGTATGGGAAAAGCTATCCCAGCG
TGCGAACGAGCTAGGTTGTACGCTATCAGATGCTATTGAGTATTTGGTGAGCGAAGCATCTCGTAGTGAACAGGCCAGCA
AGACAGTAACCAATCTTAAAGAAGATTTAAGCAAGCTCCTTTCTGACGATAAATAA

Upstream 100 bases:

>100_bases
CTAATATAAGTATGATCTTGGTCTATTCTTTCAAGACAACAATTGTTAAATAGCCTATTTTGGGTTACGCTGTCACTAGG
ATTAACTCTCGAGATTAGAC

Downstream 100 bases:

>100_bases
TCATCAACAGTAGTGGTGACATTATGATGTATGTAATCTTAATCGGTGCAGCGTTGGTTTTTTGGTTAGTCGCGGTTGAT
AGGCCGGTATTGAAAATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKYQQLENLECGWKWNYLVKKWKEGESITCHIDSSEADVAVQALLKLEHQPTGVLEWISDNMSPELDNKLKQAIRAKRKR
HFNAEQVHTKKKSIDLDYRVWEKLSQRANELGCTLSDAIEYLVSEASRSEQASKTVTNLKEDLSKLLSDDK

Sequences:

>Translated_151_residues
MKYQQLENLECGWKWNYLVKKWKEGESITCHIDSSEADVAVQALLKLEHQPTGVLEWISDNMSPELDNKLKQAIRAKRKR
HFNAEQVHTKKKSIDLDYRVWEKLSQRANELGCTLSDAIEYLVSEASRSEQASKTVTNLKEDLSKLLSDDK
>Mature_151_residues
MKYQQLENLECGWKWNYLVKKWKEGESITCHIDSSEADVAVQALLKLEHQPTGVLEWISDNMSPELDNKLKQAIRAKRKR
HFNAEQVHTKKKSIDLDYRVWEKLSQRANELGCTLSDAIEYLVSEASRSEQASKTVTNLKEDLSKLLSDDK

Specific function: Unknown

COG id: COG3120

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0268 family

Homologues:

Organism=Escherichia coli, GI1787190, Length=150, Percent_Identity=54, Blast_Score=163, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1431_VIBSL (B7VNL8)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002417043.1
- GeneID:   7161003
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_1431
- HOGENOM:   HBG297085
- OMA:   ECGWKWK
- ProtClustDB:   PRK05097
- HAMAP:   MF_01073
- InterPro:   IPR009390
- ProDom:   PD033720

Pfam domain/function: PF06303 DUF1047

EC number: NA

Molecular weight: Translated: 17493; Mature: 17493

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYQQLENLECGWKWNYLVKKWKEGESITCHIDSSEADVAVQALLKLEHQPTGVLEWISD
CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHC
NMSPELDNKLKQAIRAKRKRHFNAEQVHTKKKSIDLDYRVWEKLSQRANELGCTLSDAIE
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
YLVSEASRSEQASKTVTNLKEDLSKLLSDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYQQLENLECGWKWNYLVKKWKEGESITCHIDSSEADVAVQALLKLEHQPTGVLEWISD
CCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHC
NMSPELDNKLKQAIRAKRKRHFNAEQVHTKKKSIDLDYRVWEKLSQRANELGCTLSDAIE
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
YLVSEASRSEQASKTVTNLKEDLSKLLSDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA