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The map label for this gene is yebS [H]

Identifier: 218709404

GI number: 218709404

Start: 1546378

End: 1547679

Strand: Reverse

Name: yebS [H]

Synonym: VS_1413

Alternate gene names: 218709404

Gene position: 1547679-1546378 (Counterclockwise)

Preceding gene: 218709405

Following gene: 218709403

Centisome position: 46.91

GC content: 45.08

Gene sequence:

>1302_bases
TTGGGAGGTCGCGTGACCTCCCCATTCGTAACCAACCCTTTATCAACTAAGCAGCAGCTATCGACTCAGCACCAGTGCGA
CAGTAGCTCTGTACGTCTTTGTCAGGGCTGCGAACTTCCCGTTGATAAAATGGACATCCCTTTGGGGAAATCCGCTTACT
GCCCAAGATGCGGTACTCAGCTTTATAGAGGCGGCACCCCTAGCCTGTCTGGAAACCTTGCAATCGCTATTACCTGCTTA
TTGCTGTTTATCCCCTCACACTTTTTTGAATTCATCAGTATTCGCCTGATTGGTGTCATGATACCTGCGACATTACCATC
TGGCGTATTTACTTTAATGGGTGAAGGCTTCCCTCTACTTGGCTTGTTGATCTTATTCTGCAGTTCGATCGCCCCGTTAC
TTGTTTGTACCTCGGTACTCATCACCCATTTATCCTTGCGCTTTAAGATTTTCACACCATTTCGTTATGCATTAGCTATC
ATTCAGACACTTAAGCACTGGATGATGTTGGATGTATTTCTGGTGAGCGTGGCAATCTCGTGCTTCAAATTACAAGATTA
CTCAGATATTTTCGTCGGCCCTGGTTTAGTTGGTCTGATTCTACTGCAGCTTTTCAGTGTGTTACTGGTAAGTCGGATCA
GTGTGCGTCGCTACTGGGAAGCTTGGGCTAAAGAGTCTGACTACTCTTTTGATAAAAGTAAGAACGTACACTGTCATAAC
TGTCACCTGTCTCAGCCTGACGGACACACTTGCGTGCGTTGTCACCATGACTTATATCATCGCAAACCCTACTCTGTACA
AAAGACATGGGCTCTACTTTTTGCCGCCTCAGTGGCTATCGTGCCGGCCAACGTCATTCCAATTTCTATCGTGATAACAA
ACGGACAAAGATTAGAAGACACCATCATCTCCGGTGTCGCTTCGCTAATTAATAGCGACATGTATGGCATCGCAGCAATC
ATTTTTATTGCCAGTATCGTCGTGCCTGTCGCGAAAATACTTGGTCTAACGTATATCTTAACTTGTATCAAAATGAAGCG
TGCGGTTTACCATAGACAACGTATGACCATCTATTTCATTGTGAAATGGGTGGGAAAGTGGTCGGTAATGGATCTGTTCG
TTATTTCGATCATGATGACCTTGGTCGACCGTGGACAAATTTTAAACTTTACACCAGGTTATGGTGCAGTCGCTTTTGGC
GTCGTGGTTGTTCTCACGATGCTAGCGGCGGAAAGCTTAGATCCTAGGCTAATTTGGGATAACTACACCTCTAAAGATGA
GTCAGTGAATGAACAACGATAA

Upstream 100 bases:

>100_bases
CAGTGTGCAATCGCACGCCTGATGTTTATTGTTCTAGAGATTTAAATCAGTGTTGTTCTAGACATTTAAATCAGGTTAAA
AGTCTGATTAGTGTTTCAAC

Downstream 100 bases:

>100_bases
CCAATCACAAACGTCATATTCACCAGAAGTCAGGAAAAACAAAGGTATTTCCCCTTTGTGGATCCTGCCGATACTAACCG
TCGCATTAGCGGGTTGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGGRVTSPFVTNPLSTKQQLSTQHQCDSSSVRLCQGCELPVDKMDIPLGKSAYCPRCGTQLYRGGTPSLSGNLAIAITCL
LLFIPSHFFEFISIRLIGVMIPATLPSGVFTLMGEGFPLLGLLILFCSSIAPLLVCTSVLITHLSLRFKIFTPFRYALAI
IQTLKHWMMLDVFLVSVAISCFKLQDYSDIFVGPGLVGLILLQLFSVLLVSRISVRRYWEAWAKESDYSFDKSKNVHCHN
CHLSQPDGHTCVRCHHDLYHRKPYSVQKTWALLFAASVAIVPANVIPISIVITNGQRLEDTIISGVASLINSDMYGIAAI
IFIASIVVPVAKILGLTYILTCIKMKRAVYHRQRMTIYFIVKWVGKWSVMDLFVISIMMTLVDRGQILNFTPGYGAVAFG
VVVVLTMLAAESLDPRLIWDNYTSKDESVNEQR

Sequences:

>Translated_433_residues
MGGRVTSPFVTNPLSTKQQLSTQHQCDSSSVRLCQGCELPVDKMDIPLGKSAYCPRCGTQLYRGGTPSLSGNLAIAITCL
LLFIPSHFFEFISIRLIGVMIPATLPSGVFTLMGEGFPLLGLLILFCSSIAPLLVCTSVLITHLSLRFKIFTPFRYALAI
IQTLKHWMMLDVFLVSVAISCFKLQDYSDIFVGPGLVGLILLQLFSVLLVSRISVRRYWEAWAKESDYSFDKSKNVHCHN
CHLSQPDGHTCVRCHHDLYHRKPYSVQKTWALLFAASVAIVPANVIPISIVITNGQRLEDTIISGVASLINSDMYGIAAI
IFIASIVVPVAKILGLTYILTCIKMKRAVYHRQRMTIYFIVKWVGKWSVMDLFVISIMMTLVDRGQILNFTPGYGAVAFG
VVVVLTMLAAESLDPRLIWDNYTSKDESVNEQR
>Mature_432_residues
GGRVTSPFVTNPLSTKQQLSTQHQCDSSSVRLCQGCELPVDKMDIPLGKSAYCPRCGTQLYRGGTPSLSGNLAIAITCLL
LFIPSHFFEFISIRLIGVMIPATLPSGVFTLMGEGFPLLGLLILFCSSIAPLLVCTSVLITHLSLRFKIFTPFRYALAII
QTLKHWMMLDVFLVSVAISCFKLQDYSDIFVGPGLVGLILLQLFSVLLVSRISVRRYWEAWAKESDYSFDKSKNVHCHNC
HLSQPDGHTCVRCHHDLYHRKPYSVQKTWALLFAASVAIVPANVIPISIVITNGQRLEDTIISGVASLINSDMYGIAAII
FIASIVVPVAKILGLTYILTCIKMKRAVYHRQRMTIYFIVKWVGKWSVMDLFVISIMMTLVDRGQILNFTPGYGAVAFGV
VVVLTMLAAESLDPRLIWDNYTSKDESVNEQR

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1788137, Length=400, Percent_Identity=37.25, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1787183, Length=410, Percent_Identity=30, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR011031
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 48183; Mature: 48051

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCC
>Mature Secondary Structure 
GGRVTSPFVTNPLSTKQQLSTQHQCDSSSVRLCQGCELPVDKMDIPLGKSAYCPRCGTQ
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
LYRGGTPSLSGNLAIAITCLLLFIPSHFFEFISIRLIGVMIPATLPSGVFTLMGEGFPLL
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHH
GLLILFCSSIAPLLVCTSVLITHLSLRFKIFTPFRYALAIIQTLKHWMMLDVFLVSVAIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFKLQDYSDIFVGPGLVGLILLQLFSVLLVSRISVRRYWEAWAKESDYSFDKSKNVHCHN
HHHCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE
CHLSQPDGHTCVRCHHDLYHRKPYSVQKTWALLFAASVAIVPANVIPISIVITNGQRLED
CCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCEEEEEEEEECCCHHHH
TIISGVASLINSDMYGIAAIIFIASIVVPVAKILGLTYILTCIKMKRAVYHRQRMTIYFI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKWVGKWSVMDLFVISIMMTLVDRGQILNFTPGYGAVAFGVVVVLTMLAAESLDPRLIWD
HHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
NYTSKDESVNEQR
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]