Click here to switch to the map view.

The map label for this gene is 218709302

Identifier: 218709302

GI number: 218709302

Start: 1410214

End: 1411734

Strand: Reverse

Name: 218709302

Synonym: VS_1311

Alternate gene names: NA

Gene position: 1411734-1410214 (Counterclockwise)

Preceding gene: 218709303

Following gene: 218709301

Centisome position: 42.79

GC content: 46.88

Gene sequence:

>1521_bases
ATGTTAGACGGAATTTTACAAGGACTTTCTACCGCTGTGATGCCAATGAACATCATGATGGTAATTGTGGGCTGTTTCGT
TGGCACCTTCATCGGTATGCTTCCGGGGTTAGGTCCAATTTCAGCAATCGCGTTGATGATCCCTATTACATACGGCCTAG
ACCCTTCTTCTGGCCTAATCTTGATGGCTGGTGTGTATTACGGCGCTGTATTTGGTGGCTCAACGTCATCCATCTTAATC
AATGCTCCGGGTTGTTCTTCAACGGTAGTTACTGCGTTTGACGGCTACCCGATGGCTCAAAAAGGTCAAGCAGGTAAAGC
ACTTGCACTCGCGGCTTACTCTTCTTTCACTGGCGGTACGCTTTCAGCAATCATGCTTTTGATTGCCGCTCCGGCTCTAG
CAAGCGTGTCACTGAGCTTCCAGTCTTCAGATTACTTTGCGTTGATGCTATTAGGTTTGTCCGCTGTGGCGGCGTTTGCA
GGCCCAGGTCAGGTAATTAAAGCGTGGATGATGACTATTCTTGGTTTGATGCTATCAACCGTAGGTATCGACAAAGGGGT
TGGCGTTGAACGTTTCACTTTTGGCCTAACGGATCTGATGGATGGCTTTAGCTTCCTATTATTAGCGATGGCAACGTTCG
CACTGGGTGAAACCTTGATGGGTATTCTTAAGCCTGAGCAAGATACCAGCGCAGAAGAAAGCCAAAAGATGTCTGACATT
GGTAGCATGAAAGTCACCAAAGAAGAGTTCAAAGAAGTAGCGCCAGTTTCGATTCGCTCTTCTATTCTCGGTTTCTTTAC
CGGTGTTCTACCGGGCGCAGGTGCGACTATTGCAGCATTCCTAAGCTACGGTATGGAGCGCAGCCTAGCGCCAAAAGACA
AGCAGAAAGAGTTCGGTAAAGGCAGTATCCGTGGTCTTGTTGCTCCTGAATCAGCAAACAACGCAGCTTCAAGCGGCTCA
TTCGTTCCGTTACTAACGCTGGGTATTCCGGGCTCTGGTACAACCGCGATTATGCTTGGTGCATTGATTGCCTACGGTAT
TCAGCCAGGTCCTCGCTTGTTCGTTGAGCACCCTGATGTATTTTGGTCAGTCATCATCTCTATGTACTTTGGCAACATCG
TACTGGTTATCTTGAACCTGCCTTTAATCCCTTATATTTCTAAACTGCTAGCAGTACCTAGAACGGTTCTACTGCCAATG
ATTATCTTCTTCTCAATCACTGGCGTGTACTTGGTGTCATTTAACACGATGGATGTATTTGTGATGCTACTGGTTGCGAT
GGCAGCAATAGCATTAAGGCTAGCCAACTTCCCATTGGCACCATTACTGTTAGGCTTCATATTGGGCGGCTTGATGGAAG
AGAACTTAAGACGTGCATTGATGATCAGTGATGGTGAGCTGAACTTCTTATGGGAACGCCCTATTACGATGACCTTCACT
ATTCTGGCGGTACTGGTGCTGTCTAGCCCGATTCTAGTGAAACTATTTAAGAGTTTTAGAGCGAAACCAGTAGAAGTGTA
A

Upstream 100 bases:

>100_bases
TCGTTCCCTTTCGTTATCGCGTTCTTTCTTTTATTAACTCAAGGCTTAGATATCTACCTAGAGCCTGGTTTAATCTTCAC
TCTTTGGTAGGGATAACATT

Downstream 100 bases:

>100_bases
AGCTCTACCGAATCAACGAAACCTCAACAAAAGGAGCCATTGGCTCCTTTTTTCATTTAGAGCCTCAATTCAAACCAACG
GTTAAAGATGGTAGCAAACT

Product: tricarboxylate transport membrane protein

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MLDGILQGLSTAVMPMNIMMVIVGCFVGTFIGMLPGLGPISAIALMIPITYGLDPSSGLILMAGVYYGAVFGGSTSSILI
NAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYSSFTGGTLSAIMLLIAAPALASVSLSFQSSDYFALMLLGLSAVAAFA
GPGQVIKAWMMTILGLMLSTVGIDKGVGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPEQDTSAEESQKMSDI
GSMKVTKEEFKEVAPVSIRSSILGFFTGVLPGAGATIAAFLSYGMERSLAPKDKQKEFGKGSIRGLVAPESANNAASSGS
FVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVEHPDVFWSVIISMYFGNIVLVILNLPLIPYISKLLAVPRTVLLPM
IIFFSITGVYLVSFNTMDVFVMLLVAMAAIALRLANFPLAPLLLGFILGGLMEENLRRALMISDGELNFLWERPITMTFT
ILAVLVLSSPILVKLFKSFRAKPVEV

Sequences:

>Translated_506_residues
MLDGILQGLSTAVMPMNIMMVIVGCFVGTFIGMLPGLGPISAIALMIPITYGLDPSSGLILMAGVYYGAVFGGSTSSILI
NAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYSSFTGGTLSAIMLLIAAPALASVSLSFQSSDYFALMLLGLSAVAAFA
GPGQVIKAWMMTILGLMLSTVGIDKGVGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPEQDTSAEESQKMSDI
GSMKVTKEEFKEVAPVSIRSSILGFFTGVLPGAGATIAAFLSYGMERSLAPKDKQKEFGKGSIRGLVAPESANNAASSGS
FVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVEHPDVFWSVIISMYFGNIVLVILNLPLIPYISKLLAVPRTVLLPM
IIFFSITGVYLVSFNTMDVFVMLLVAMAAIALRLANFPLAPLLLGFILGGLMEENLRRALMISDGELNFLWERPITMTFT
ILAVLVLSSPILVKLFKSFRAKPVEV
>Mature_506_residues
MLDGILQGLSTAVMPMNIMMVIVGCFVGTFIGMLPGLGPISAIALMIPITYGLDPSSGLILMAGVYYGAVFGGSTSSILI
NAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYSSFTGGTLSAIMLLIAAPALASVSLSFQSSDYFALMLLGLSAVAAFA
GPGQVIKAWMMTILGLMLSTVGIDKGVGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPEQDTSAEESQKMSDI
GSMKVTKEEFKEVAPVSIRSSILGFFTGVLPGAGATIAAFLSYGMERSLAPKDKQKEFGKGSIRGLVAPESANNAASSGS
FVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVEHPDVFWSVIISMYFGNIVLVILNLPLIPYISKLLAVPRTVLLPM
IIFFSITGVYLVSFNTMDVFVMLLVAMAAIALRLANFPLAPLLLGFILGGLMEENLRRALMISDGELNFLWERPITMTFT
ILAVLVLSSPILVKLFKSFRAKPVEV

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 53326; Mature: 53326

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGILQGLSTAVMPMNIMMVIVGCFVGTFIGMLPGLGPISAIALMIPITYGLDPSSGLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE
LMAGVYYGAVFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYSSFTGGT
EEHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHCCCCHH
LSAIMLLIAAPALASVSLSFQSSDYFALMLLGLSAVAAFAGPGQVIKAWMMTILGLMLST
HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGIDKGVGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPEQDTSAEESQKMSDI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GSMKVTKEEFKEVAPVSIRSSILGFFTGVLPGAGATIAAFLSYGMERSLAPKDKQKEFGK
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
GSIRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVEHPDV
CCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCHH
FWSVIISMYFGNIVLVILNLPLIPYISKLLAVPRTVLLPMIIFFSITGVYLVSFNTMDVF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCHHHHH
VMLLVAMAAIALRLANFPLAPLLLGFILGGLMEENLRRALMISDGELNFLWERPITMTFT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHH
ILAVLVLSSPILVKLFKSFRAKPVEV
HHHHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDGILQGLSTAVMPMNIMMVIVGCFVGTFIGMLPGLGPISAIALMIPITYGLDPSSGLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEE
LMAGVYYGAVFGGSTSSILINAPGCSSTVVTAFDGYPMAQKGQAGKALALAAYSSFTGGT
EEHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHCCCCHH
LSAIMLLIAAPALASVSLSFQSSDYFALMLLGLSAVAAFAGPGQVIKAWMMTILGLMLST
HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VGIDKGVGVERFTFGLTDLMDGFSFLLLAMATFALGETLMGILKPEQDTSAEESQKMSDI
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GSMKVTKEEFKEVAPVSIRSSILGFFTGVLPGAGATIAAFLSYGMERSLAPKDKQKEFGK
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCC
GSIRGLVAPESANNAASSGSFVPLLTLGIPGSGTTAIMLGALIAYGIQPGPRLFVEHPDV
CCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCHH
FWSVIISMYFGNIVLVILNLPLIPYISKLLAVPRTVLLPMIIFFSITGVYLVSFNTMDVF
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCHHHHH
VMLLVAMAAIALRLANFPLAPLLLGFILGGLMEENLRRALMISDGELNFLWERPITMTFT
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHHH
ILAVLVLSSPILVKLFKSFRAKPVEV
HHHHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]