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The map label for this gene is yfcA [C]

Identifier: 218709301

GI number: 218709301

Start: 1409263

End: 1410036

Strand: Reverse

Name: yfcA [C]

Synonym: VS_1310

Alternate gene names: 218709301

Gene position: 1410036-1409263 (Counterclockwise)

Preceding gene: 218709302

Following gene: 218709300

Centisome position: 42.74

GC content: 47.29

Gene sequence:

>774_bases
TTGGATTCTAAAACTATGGATTGGTTGATTCTGTTCTTATCAGGGGTGATTGGCGGTGTGCTCAACTCCATTGCGGGTGG
CGGCAGCTTCGTCACCTTCCCTGCTTTGTTATTTGCTGGCGTTCCACCAATAGCAGCCAACGCGACCAATACCTTTGCTT
CGTGTGCTGGATACATTAGCGGAGCCTACGCCCTGCGCCACGAAATTCAATCTGGTACTAAACAGCTAAAACTGACTATA
GCTTTATGTGTGATTGGCGGTGGTATCGGGGCTTTCTTGCTACTTCACACACCAGAAGCTCTGTTCACTCAATCCGTTCC
TTGGCTGCTGCTGTTTGCAGCTTTGCTATTCACGTTTGGTGGCACGCTCAATAAATGGCTCAAACAAGCGACAGCAAAAC
ATAAGCACGCCACCAGCGCAGGCGCATTCTTTTCCGCTTTATTGCTTTTGATTGTCTGTATCTACGGTGGGTATTTTAAT
GCAGGTTTGGGCATTGTGACATTGAGCTATTTGGCGCTGGCTGGTTACACCAACATCAACGTGATGAATGGCATCAAACT
GCTCGTGTCCGCGTGTGCTTCCCTAGCAGCGATCGTGTTTTTTATCGTCAATGGTTCGATTGATTGGCCATCTGGCATGG
CTGTATTATTGGGTACATTGGTTGGTGGTTATTATTCAGCAAAAATCTCTCGCCGCATCCCTCAACACTATGTTCGTACC
ACAGTGATCATCGCGAGCTTTTTGATCACCGCTTACTTTTTCTATGCTAACTAG

Upstream 100 bases:

>100_bases
ACGGTTAAAGATGGTAGCAAACTCACAAACCTATCTTTACAACACACATGGCGCTGATATTCATAACAAATTCAAGTAAG
GTAACCAATTAGTTAACGTA

Downstream 100 bases:

>100_bases
GTTTTATACTAAGTAGGTTCTATACCAACTAGATTCTATGTTAAGTCAGTTTTGTGCCAACTCGGTTTAAGCTAACCAGA
CATTAGGGTCAATAAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDSKTMDWLILFLSGVIGGVLNSIAGGGSFVTFPALLFAGVPPIAANATNTFASCAGYISGAYALRHEIQSGTKQLKLTI
ALCVIGGGIGAFLLLHTPEALFTQSVPWLLLFAALLFTFGGTLNKWLKQATAKHKHATSAGAFFSALLLLIVCIYGGYFN
AGLGIVTLSYLALAGYTNINVMNGIKLLVSACASLAAIVFFIVNGSIDWPSGMAVLLGTLVGGYYSAKISRRIPQHYVRT
TVIIASFLITAYFFYAN

Sequences:

>Translated_257_residues
MDSKTMDWLILFLSGVIGGVLNSIAGGGSFVTFPALLFAGVPPIAANATNTFASCAGYISGAYALRHEIQSGTKQLKLTI
ALCVIGGGIGAFLLLHTPEALFTQSVPWLLLFAALLFTFGGTLNKWLKQATAKHKHATSAGAFFSALLLLIVCIYGGYFN
AGLGIVTLSYLALAGYTNINVMNGIKLLVSACASLAAIVFFIVNGSIDWPSGMAVLLGTLVGGYYSAKISRRIPQHYVRT
TVIIASFLITAYFFYAN
>Mature_257_residues
MDSKTMDWLILFLSGVIGGVLNSIAGGGSFVTFPALLFAGVPPIAANATNTFASCAGYISGAYALRHEIQSGTKQLKLTI
ALCVIGGGIGAFLLLHTPEALFTQSVPWLLLFAALLFTFGGTLNKWLKQATAKHKHATSAGAFFSALLLLIVCIYGGYFN
AGLGIVTLSYLALAGYTNINVMNGIKLLVSACASLAAIVFFIVNGSIDWPSGMAVLLGTLVGGYYSAKISRRIPQHYVRT
TVIIASFLITAYFFYAN

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=248, Percent_Identity=28.2258064516129, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27153; Mature: 27153

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]