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The map label for this gene is yaaJ [C]

Identifier: 218709284

GI number: 218709284

Start: 1388288

End: 1389658

Strand: Reverse

Name: yaaJ [C]

Synonym: VS_1291

Alternate gene names: 218709284

Gene position: 1389658-1388288 (Counterclockwise)

Preceding gene: 218709287

Following gene: 218709282

Centisome position: 42.12

GC content: 47.85

Gene sequence:

>1371_bases
ATGAACCACCTACAAGCTACACTACAAACCATCAACCAATTCGTTTGGGGACCACCACTACTTATTCTGCTAGTGGGTAC
AGGTATCTATTTTACTTTTCGCTTAGGCTTACTCCAGTTTAGACACCTCCCAACCGCGCTAAAAATGGTGTTCAGCAAAG
ACAAATCCGGTACGGGTGACGTATCAAGCTTCGCCGCTTTGTGTACAGCGCTTTCCGCAACGATTGGTACAGGCAATATT
GTAGGCGTAGCGACCGCAATCAAGATTGGTGGCCCTGGCGCCCTATTCTGGATGTGGCTTGCCGCTGTATTTGGTATGGC
GACCAAATACGCAGAATGTCTACTTGCTGTTAAATACCGTAGAACCGATAGCAATGGCGAAATGGTTGGCGGCCCAATGT
ACTACCTGCAATACGGTGTGGGCTCTCGAATCTTAGCGGTCATGTTCGCTGTCTTCGCGCTCGGTGTTGCTTGCTTCGGT
ATCGGTACCTTCCCACAAGTAAACGCTATCTTAGACGCAACTCAAATCTCATTTGGCGCTTCACGTGAAATGTCAGCGGT
TGTCCTCACGATACTAGTGGCAGTGGTAACCCTTGGTGGTATTCAATCGATCGCTAAAGTAGCAGGGAAAGTCGTTCCTA
CGATGGCGGTGATGTACGTCGTCGCGTGTTTAAGCGTTCTGATTTCAAATGCAGACCAACTACTGAATGCCATTACCCTT
GTTGTGACTTCTGCGTTTACCAACACAGCAGCAACTGGTGGTTTCTTTGGTGCGAGCATCATGCTTGCTATCCAATCAGG
TATCGCTCGTGGCGTGTTCTCGAACGAATCTGGCCTAGGTAGCGCACCAATGGCTGCAGCAGCGGCTAAAACAGACTCAT
GTGTGAAACAAGGGCTTGTCTCTATGACAGGCACCTTCTTCGATACCATCATCATCTGTACGATGACCGGCTTGGCGCTT
ATCTTAACGGGCGCTTGGCAGACTGACCTTTCTGGCGCTGCGATGACCACTCACGCGTTCGCTGTTGGTTTGAATGCAGA
CACCCTTGGCCCTATGTTGGTTTCTGTTGGCTTAATCTTCTTTGCGTTTACAACAATTTTAGGTTGGAACTACTACGGTG
AGCGCTGTGTTGTTTTCTTGCTGGGTACCAAAGCAGTATTGCCTTACAAGATTATCTTCATCGGCTTGGTTGCTTCTGGT
GCATTCTTAAAGCTCGACATGATCTGGATAATGGCGGATATCGTGAACGGCCTAATGGCAATTCCGAACCTAATTGGGCT
TATCTTACTGCGCCATGTTGTTATCGAAGAAACCAAGTTATTCTTCAAACCGCTAACTTCTTCAAATGATTGTGAAGCAG
TTAAAGCATAA

Upstream 100 bases:

>100_bases
CTATCTAGAAATCCGTCTGTATTAAGTAGTGCTATCGATCCCTGTGATCTGCACTGCCTTCCCTCTTCTCCTTAAATTTT
ATATTTATTAAGGGGAATCT

Downstream 100 bases:

>100_bases
TAAGAATTGAACGATCAAAAACGCCCGCAATGATGTGCGGGCGTTTTATTATAAAACTAATGGCTATGTGCCAGTGATTT
AGATTCCAATACATTATACC

Product: sodium:alanine symporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MNHLQATLQTINQFVWGPPLLILLVGTGIYFTFRLGLLQFRHLPTALKMVFSKDKSGTGDVSSFAALCTALSATIGTGNI
VGVATAIKIGGPGALFWMWLAAVFGMATKYAECLLAVKYRRTDSNGEMVGGPMYYLQYGVGSRILAVMFAVFALGVACFG
IGTFPQVNAILDATQISFGASREMSAVVLTILVAVVTLGGIQSIAKVAGKVVPTMAVMYVVACLSVLISNADQLLNAITL
VVTSAFTNTAATGGFFGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVKQGLVSMTGTFFDTIIICTMTGLAL
ILTGAWQTDLSGAAMTTHAFAVGLNADTLGPMLVSVGLIFFAFTTILGWNYYGERCVVFLLGTKAVLPYKIIFIGLVASG
AFLKLDMIWIMADIVNGLMAIPNLIGLILLRHVVIEETKLFFKPLTSSNDCEAVKA

Sequences:

>Translated_456_residues
MNHLQATLQTINQFVWGPPLLILLVGTGIYFTFRLGLLQFRHLPTALKMVFSKDKSGTGDVSSFAALCTALSATIGTGNI
VGVATAIKIGGPGALFWMWLAAVFGMATKYAECLLAVKYRRTDSNGEMVGGPMYYLQYGVGSRILAVMFAVFALGVACFG
IGTFPQVNAILDATQISFGASREMSAVVLTILVAVVTLGGIQSIAKVAGKVVPTMAVMYVVACLSVLISNADQLLNAITL
VVTSAFTNTAATGGFFGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVKQGLVSMTGTFFDTIIICTMTGLAL
ILTGAWQTDLSGAAMTTHAFAVGLNADTLGPMLVSVGLIFFAFTTILGWNYYGERCVVFLLGTKAVLPYKIIFIGLVASG
AFLKLDMIWIMADIVNGLMAIPNLIGLILLRHVVIEETKLFFKPLTSSNDCEAVKA
>Mature_456_residues
MNHLQATLQTINQFVWGPPLLILLVGTGIYFTFRLGLLQFRHLPTALKMVFSKDKSGTGDVSSFAALCTALSATIGTGNI
VGVATAIKIGGPGALFWMWLAAVFGMATKYAECLLAVKYRRTDSNGEMVGGPMYYLQYGVGSRILAVMFAVFALGVACFG
IGTFPQVNAILDATQISFGASREMSAVVLTILVAVVTLGGIQSIAKVAGKVVPTMAVMYVVACLSVLISNADQLLNAITL
VVTSAFTNTAATGGFFGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVKQGLVSMTGTFFDTIIICTMTGLAL
ILTGAWQTDLSGAAMTTHAFAVGLNADTLGPMLVSVGLIFFAFTTILGWNYYGERCVVFLLGTKAVLPYKIIFIGLVASG
AFLKLDMIWIMADIVNGLMAIPNLIGLILLRHVVIEETKLFFKPLTSSNDCEAVKA

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=451, Percent_Identity=36.5853658536585, Blast_Score=254, Evalue=7e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47928; Mature: 47928

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLQATLQTINQFVWGPPLLILLVGTGIYFTFRLGLLQFRHLPTALKMVFSKDKSGTGD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VSSFAALCTALSATIGTGNIVGVATAIKIGGPGALFWMWLAAVFGMATKYAECLLAVKYR
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTDSNGEMVGGPMYYLQYGVGSRILAVMFAVFALGVACFGIGTFPQVNAILDATQISFGA
EECCCCCEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
SREMSAVVLTILVAVVTLGGIQSIAKVAGKVVPTMAVMYVVACLSVLISNADQLLNAITL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VVTSAFTNTAATGGFFGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVKQGLV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SMTGTFFDTIIICTMTGLALILTGAWQTDLSGAAMTTHAFAVGLNADTLGPMLVSVGLIF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHH
FAFTTILGWNYYGERCVVFLLGTKAVLPYKIIFIGLVASGAFLKLDMIWIMADIVNGLMA
HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IPNLIGLILLRHVVIEETKLFFKPLTSSNDCEAVKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNHLQATLQTINQFVWGPPLLILLVGTGIYFTFRLGLLQFRHLPTALKMVFSKDKSGTGD
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VSSFAALCTALSATIGTGNIVGVATAIKIGGPGALFWMWLAAVFGMATKYAECLLAVKYR
HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTDSNGEMVGGPMYYLQYGVGSRILAVMFAVFALGVACFGIGTFPQVNAILDATQISFGA
EECCCCCEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC
SREMSAVVLTILVAVVTLGGIQSIAKVAGKVVPTMAVMYVVACLSVLISNADQLLNAITL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VVTSAFTNTAATGGFFGASIMLAIQSGIARGVFSNESGLGSAPMAAAAAKTDSCVKQGLV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SMTGTFFDTIIICTMTGLALILTGAWQTDLSGAAMTTHAFAVGLNADTLGPMLVSVGLIF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCHHHHHHHHHHHHH
FAFTTILGWNYYGERCVVFLLGTKAVLPYKIIFIGLVASGAFLKLDMIWIMADIVNGLMA
HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IPNLIGLILLRHVVIEETKLFFKPLTSSNDCEAVKA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]