Click here to switch to the map view.

The map label for this gene is qseC [H]

Identifier: 218709129

GI number: 218709129

Start: 1202921

End: 1204219

Strand: Reverse

Name: qseC [H]

Synonym: VS_1136

Alternate gene names: 218709129

Gene position: 1204219-1202921 (Counterclockwise)

Preceding gene: 218709130

Following gene: 218709128

Centisome position: 36.5

GC content: 44.88

Gene sequence:

>1299_bases
TTGATTTCCAACTTTCTGACAAGCACTAAAACCCTCACCGGCCGCTTAGCTGTTTTCTTTGGGCTAATGGCCGTGATTGT
GTCTGCGTTCGTCTATGTCGTTTTTATTGTCGCGCTCTACATGTCTGAAGACCGGGTCGGTGAAAGACGCATCTTGATTG
ACCGCAATTACGCCGTCGAGCTATTTCAAGCCGGAGAAAGTGGTGAGTTAAGAATTGATGATCTGACCGTCGCCTATAAC
GACCCGTCATTCGTACCTCCCGAATATTATAAGCTCATTGCAAATAAAGAGAGCTTTCTCGGAGAGATCGGCGAAGAGCC
AGAGTCAAGAATGGTCTATGTTGGCGAGTATTCTGACAAAGGAAAAACCCACCCAATAATCCTACTTTCCGAAATAGACC
GTGTTGAATTTGCTATTTCTGAACTTGTGTACGCGACCGCCTTTGTGCTCACGTTACTTTCTATCTTAATTTTTAGTTTT
GGTGCTCTGCTCTATCGACTGTCAAAACGACTGATTGAACCATTCAACTCTCTGTCTGAGCAACTTGAGTCGAATAAACT
CAATCTCAACGAAGAGTTCGGTGTGAGTGATGATGCGGCAGTTGAATTTCGTCAGCTAACCGATCAACTGAATCAGTATC
GTCGAGAAATCAATTCCTTGGTCAAGCGTGAACAAGCCTTTGCTCGATACTCAAGCCATGAGTTAAGAACACCACTAACC
GTTGCTCGTGGTGCGAATAAATTACTATTAAGAAGCGAAACCACCGAGTTTCAATCTCGGCAGGTTGCACGCATTGATGA
AGCCATTGTTCAGATGTCTGAGATGGTCGATGCCTTGCTTGGCCTAGTTCGTTACGAAAGAAATAGTGACGATGCACCGC
TGCGCTTGTTTAGCCAGCAAGAATTAGAGACCATCGTTTCCAAAAATACGTTACAAGCAAATGAGAAAGCAGTCGAAATA
TCCCTACTCGTTCAATCTGAGCCTATAATTCAAGCCACCAGTGCGATCATGAACATGTTGGTTGGCAACTTGTTGAGAAA
TGCGATTGCAGCGACCAATAGTGGCACAGTGAGCATCACTCTCTCGCAAGACAATCTGGTAATTGAAGACCAAGGAGAAG
GCCTTCAGGAACAGTACAATCCGAATGGTCATGGATTAGGTTTATTGATTGTCGACGACTTGTGTCAGCGCTTCCATTGG
GACTTTGAGTTGGTCAATCGCAACTCTGGAGGGTGTACTGCAAGAATCGCCTTTCAGACAGATTCCTCCTTATCCACATT
CAAGCAAGCAAACTCGTAA

Upstream 100 bases:

>100_bases
GCAGTCACATCTATCAATTACGAAATCAACTCGACAAGCCTTTTGACAGTCAAATGTTGATTACGGTTCCTAAAATAGGA
TTCCGCTTGGAGTCATCTAA

Downstream 100 bases:

>100_bases
TACGAAGCTCAATACCCTATGAAAACTTGATTTAGTTGGTTTACAGCACTCGCTAGCTACTAGATACTCAGTAGTCCTTT
TTGATTTAAAAATGCTGGCT

Product: putative two-component sensor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MISNFLTSTKTLTGRLAVFFGLMAVIVSAFVYVVFIVALYMSEDRVGERRILIDRNYAVELFQAGESGELRIDDLTVAYN
DPSFVPPEYYKLIANKESFLGEIGEEPESRMVYVGEYSDKGKTHPIILLSEIDRVEFAISELVYATAFVLTLLSILIFSF
GALLYRLSKRLIEPFNSLSEQLESNKLNLNEEFGVSDDAAVEFRQLTDQLNQYRREINSLVKREQAFARYSSHELRTPLT
VARGANKLLLRSETTEFQSRQVARIDEAIVQMSEMVDALLGLVRYERNSDDAPLRLFSQQELETIVSKNTLQANEKAVEI
SLLVQSEPIIQATSAIMNMLVGNLLRNAIAATNSGTVSITLSQDNLVIEDQGEGLQEQYNPNGHGLGLLIVDDLCQRFHW
DFELVNRNSGGCTARIAFQTDSSLSTFKQANS

Sequences:

>Translated_432_residues
MISNFLTSTKTLTGRLAVFFGLMAVIVSAFVYVVFIVALYMSEDRVGERRILIDRNYAVELFQAGESGELRIDDLTVAYN
DPSFVPPEYYKLIANKESFLGEIGEEPESRMVYVGEYSDKGKTHPIILLSEIDRVEFAISELVYATAFVLTLLSILIFSF
GALLYRLSKRLIEPFNSLSEQLESNKLNLNEEFGVSDDAAVEFRQLTDQLNQYRREINSLVKREQAFARYSSHELRTPLT
VARGANKLLLRSETTEFQSRQVARIDEAIVQMSEMVDALLGLVRYERNSDDAPLRLFSQQELETIVSKNTLQANEKAVEI
SLLVQSEPIIQATSAIMNMLVGNLLRNAIAATNSGTVSITLSQDNLVIEDQGEGLQEQYNPNGHGLGLLIVDDLCQRFHW
DFELVNRNSGGCTARIAFQTDSSLSTFKQANS
>Mature_432_residues
MISNFLTSTKTLTGRLAVFFGLMAVIVSAFVYVVFIVALYMSEDRVGERRILIDRNYAVELFQAGESGELRIDDLTVAYN
DPSFVPPEYYKLIANKESFLGEIGEEPESRMVYVGEYSDKGKTHPIILLSEIDRVEFAISELVYATAFVLTLLSILIFSF
GALLYRLSKRLIEPFNSLSEQLESNKLNLNEEFGVSDDAAVEFRQLTDQLNQYRREINSLVKREQAFARYSSHELRTPLT
VARGANKLLLRSETTEFQSRQVARIDEAIVQMSEMVDALLGLVRYERNSDDAPLRLFSQQELETIVSKNTLQANEKAVEI
SLLVQSEPIIQATSAIMNMLVGNLLRNAIAATNSGTVSITLSQDNLVIEDQGEGLQEQYNPNGHGLGLLIVDDLCQRFHW
DFELVNRNSGGCTARIAFQTDSSLSTFKQANS

Specific function: Member of a two-component regulatory system qseB/qseC. May activate qseB by phosphorylation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790551, Length=313, Percent_Identity=26.517571884984, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789403, Length=338, Percent_Identity=23.9644970414201, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 48523; Mature: 48523

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNFLTSTKTLTGRLAVFFGLMAVIVSAFVYVVFIVALYMSEDRVGERRILIDRNYAVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEE
LFQAGESGELRIDDLTVAYNDPSFVPPEYYKLIANKESFLGEIGEEPESRMVYVGEYSDK
EEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCC
GKTHPIILLSEIDRVEFAISELVYATAFVLTLLSILIFSFGALLYRLSKRLIEPFNSLSE
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLESNKLNLNEEFGVSDDAAVEFRQLTDQLNQYRREINSLVKREQAFARYSSHELRTPLT
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VARGANKLLLRSETTEFQSRQVARIDEAIVQMSEMVDALLGLVRYERNSDDAPLRLFSQQ
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ELETIVSKNTLQANEKAVEISLLVQSEPIIQATSAIMNMLVGNLLRNAIAATNSGTVSIT
HHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LSQDNLVIEDQGEGLQEQYNPNGHGLGLLIVDDLCQRFHWDFELVNRNSGGCTARIAFQT
EECCCEEEECCCCCHHHHCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCEEEEEEEEC
DSSLSTFKQANS
CCHHHHHHHCCC
>Mature Secondary Structure
MISNFLTSTKTLTGRLAVFFGLMAVIVSAFVYVVFIVALYMSEDRVGERRILIDRNYAVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEE
LFQAGESGELRIDDLTVAYNDPSFVPPEYYKLIANKESFLGEIGEEPESRMVYVGEYSDK
EEECCCCCCEEEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCC
GKTHPIILLSEIDRVEFAISELVYATAFVLTLLSILIFSFGALLYRLSKRLIEPFNSLSE
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLESNKLNLNEEFGVSDDAAVEFRQLTDQLNQYRREINSLVKREQAFARYSSHELRTPLT
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VARGANKLLLRSETTEFQSRQVARIDEAIVQMSEMVDALLGLVRYERNSDDAPLRLFSQQ
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ELETIVSKNTLQANEKAVEISLLVQSEPIIQATSAIMNMLVGNLLRNAIAATNSGTVSIT
HHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LSQDNLVIEDQGEGLQEQYNPNGHGLGLLIVDDLCQRFHWDFELVNRNSGGCTARIAFQT
EECCCEEEECCCCCHHHHCCCCCCCEEEEHHHHHHHHHCCCEEEEECCCCCEEEEEEEEC
DSSLSTFKQANS
CCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]