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The map label for this gene is glgA

Identifier: 218709077

GI number: 218709077

Start: 1141567

End: 1143021

Strand: Direct

Name: glgA

Synonym: VS_1083

Alternate gene names: 218709077

Gene position: 1141567-1143021 (Clockwise)

Preceding gene: 218709076

Following gene: 218709078

Centisome position: 34.6

GC content: 43.99

Gene sequence:

>1455_bases
TTGGTTACTAAGACTCTCTCGGTACTTTTTGTAGCGTCTGAAGTTGAAGGCTTGATTAAAAGTGGTGGCTTGGCTGATGT
AGCCAAGGCACTGCCAAAAGCGTTACAAACACTCGAACAAGATGTTCGAGTGACCATCCCTGCTTATAGAAACATTCCAA
ACATTGATTCAGCTGAAGTGATTTTGTCGACCGAGCTCGATCATTGGCCTCATACTGCTTATCAAGTCAAAAAGTTGAGT
GTCGAAGGTGTTCAAATCTTTGCTATTGAATGTGCCAAGTATTTCGATCGCCCTGAAATGTACGCAGAGAACAATCAAGC
GTATGCCGATAACGGAGAGCGCTTCTCGTTCTTCAGTACGGCTTGTTTGGATATGCTTCCTAAGCTCGCGTTTCAACCTG
ATATCATTCATGCAAATGACTGGCACACAGGTTTTGTGCCGTTCTTGCTTAAATCACGTTATCAACAACACGATTTCTTT
GAAAATACGCGCAGTGTTATCTCGATTCACAATGCAGTTTTCAAAGGGGTGTTCGCATACGATGAACTGCAATGTCTGTC
AGAGATGCACAGTTACAATGTGCCTGAAGCATCTGTAAGTGACACGCATGTCACCATGCTAAAAGCAGGGGTGATGTGTG
CCGATAAGATCAATGCAGTAAGCCCAACGTATGCAGAAGAGCTGAAAACGGAGTTAGGTAGCCATGGCATGGCTGCAGAG
TTCCAACATCGTTCGGCCGACTTATTTGGTATTCTCAACGGTTGTGATTATGGAGCTTGGAACCCGGAAACAGACGCTTT
CCTTCCTCGTAAATTCAAAGCAACGAAACACAGCATGACTCGTGGGAAATCTGCTTGTAAGCAAAAACTGCAACAAGATG
TTGGTTTACCCGTTACCGATTGTGCGGTTTATGGCATGGTTTGCCGTCTGACCAACCAAAAAGGCGTTCATTACTTACTG
CCTATCATCGAGCAGTTCTTGAAAAACGAATTGCAGATCGTGATTGTCGGTACTGGTGATCCGGTTTTGGCGAGTCAATT
GAAAGAGTTATCAGCACTTCATTCAGACAAGTTCTCATTCGTAGAAGCCTACAATAATGAACTAGCGCATTTGGTTGAAG
CGGGCTCTGATTTTTTCTTGATGCCTTCTGAATTTGAGCCTTGTGGCTTGAACCAAATCTACAGCATGGCTTACGGCACT
TTGCCTATTGTGCGCTCTGTTGGCGGTTTAAAAGACAGTGTGAATGATTACGATCAGGAGCCCGAGATAGCAACAGGCTT
TGCTTTTGAAGAACCAACACCGCAAGCATTGCTAGCGGTATTACATCGCTCATTACTACTTTATGCTCAAAATCCATCTG
AAATTAAGCGCGTTCAACTTTACGCGATGCAACAAGATTTTAGTTGGGAAGATGCGGCAGAAGAATATCTTGCGATGTAC
CATTCTGCATTTTAA

Upstream 100 bases:

>100_bases
ATCGCACCTGGAACACAGATTGGCGTAAATCTGAAAGAAGATAAAAAGCATTACCATGTCTCTGACGATGGTGTAGTAGT
TATTTCCAAAGGAGCTCGAG

Downstream 100 bases:

>100_bases
CTTGTTGACTTAGCTTTAAAATACAGTTGTTGAATAACAACTGTTCATAATAAAAGAAGGCGCTCTGCTGATAGAGTGCC
TTTTTTTTTCTGGTCAGATC

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MVTKTLSVLFVASEVEGLIKSGGLADVAKALPKALQTLEQDVRVTIPAYRNIPNIDSAEVILSTELDHWPHTAYQVKKLS
VEGVQIFAIECAKYFDRPEMYAENNQAYADNGERFSFFSTACLDMLPKLAFQPDIIHANDWHTGFVPFLLKSRYQQHDFF
ENTRSVISIHNAVFKGVFAYDELQCLSEMHSYNVPEASVSDTHVTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAE
FQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPVTDCAVYGMVCRLTNQKGVHYLL
PIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSFVEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGT
LPIVRSVGGLKDSVNDYDQEPEIATGFAFEEPTPQALLAVLHRSLLLYAQNPSEIKRVQLYAMQQDFSWEDAAEEYLAMY
HSAF

Sequences:

>Translated_484_residues
MVTKTLSVLFVASEVEGLIKSGGLADVAKALPKALQTLEQDVRVTIPAYRNIPNIDSAEVILSTELDHWPHTAYQVKKLS
VEGVQIFAIECAKYFDRPEMYAENNQAYADNGERFSFFSTACLDMLPKLAFQPDIIHANDWHTGFVPFLLKSRYQQHDFF
ENTRSVISIHNAVFKGVFAYDELQCLSEMHSYNVPEASVSDTHVTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAE
FQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPVTDCAVYGMVCRLTNQKGVHYLL
PIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSFVEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGT
LPIVRSVGGLKDSVNDYDQEPEIATGFAFEEPTPQALLAVLHRSLLLYAQNPSEIKRVQLYAMQQDFSWEDAAEEYLAMY
HSAF
>Mature_484_residues
MVTKTLSVLFVASEVEGLIKSGGLADVAKALPKALQTLEQDVRVTIPAYRNIPNIDSAEVILSTELDHWPHTAYQVKKLS
VEGVQIFAIECAKYFDRPEMYAENNQAYADNGERFSFFSTACLDMLPKLAFQPDIIHANDWHTGFVPFLLKSRYQQHDFF
ENTRSVISIHNAVFKGVFAYDELQCLSEMHSYNVPEASVSDTHVTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAE
FQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPVTDCAVYGMVCRLTNQKGVHYLL
PIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSFVEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGT
LPIVRSVGGLKDSVNDYDQEPEIATGFAFEEPTPQALLAVLHRSLLLYAQNPSEIKRVQLYAMQQDFSWEDAAEEYLAMY
HSAF

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=486, Percent_Identity=34.9794238683128, Blast_Score=273, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_VIBSL (B7VM42)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416698.1
- GeneID:   7160675
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_1083
- HOGENOM:   HBG596384
- OMA:   SIHNLLF
- ProtClustDB:   PRK00654
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 54097; Mature: 54097

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: BINDING 20-20

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTKTLSVLFVASEVEGLIKSGGLADVAKALPKALQTLEQDVRVTIPAYRNIPNIDSAEV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECHHCCCCCCCCCCE
ILSTELDHWPHTAYQVKKLSVEGVQIFAIECAKYFDRPEMYAENNQAYADNGERFSFFST
EEEECCCCCCCCHHHHHHEEECCEEEEEEHHHHHCCCCCHHHCCCCEECCCCCEEHHHHH
ACLDMLPKLAFQPDIIHANDWHTGFVPFLLKSRYQQHDFFENTRSVISIHNAVFKGVFAY
HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELQCLSEMHSYNVPEASVSDTHVTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
FQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPVTD
HHHCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
CAVYGMVCRLTNQKGVHYLLPIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSF
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHH
VEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRSVGGLKDSVNDYDQE
HHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PEIATGFAFEEPTPQALLAVLHRSLLLYAQNPSEIKRVQLYAMQQDFSWEDAAEEYLAMY
CCCEECCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HSAF
HHCC
>Mature Secondary Structure
MVTKTLSVLFVASEVEGLIKSGGLADVAKALPKALQTLEQDVRVTIPAYRNIPNIDSAEV
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEECHHCCCCCCCCCCE
ILSTELDHWPHTAYQVKKLSVEGVQIFAIECAKYFDRPEMYAENNQAYADNGERFSFFST
EEEECCCCCCCCHHHHHHEEECCEEEEEEHHHHHCCCCCHHHCCCCEECCCCCEEHHHHH
ACLDMLPKLAFQPDIIHANDWHTGFVPFLLKSRYQQHDFFENTRSVISIHNAVFKGVFAY
HHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DELQCLSEMHSYNVPEASVSDTHVTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHH
FQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPVTD
HHHCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
CAVYGMVCRLTNQKGVHYLLPIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSF
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHH
VEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRSVGGLKDSVNDYDQE
HHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCC
PEIATGFAFEEPTPQALLAVLHRSLLLYAQNPSEIKRVQLYAMQQDFSWEDAAEEYLAMY
CCCEECCCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
HSAF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA