Click here to switch to the map view.

The map label for this gene is glgC [H]

Identifier: 218709076

GI number: 218709076

Start: 1140360

End: 1141577

Strand: Direct

Name: glgC [H]

Synonym: VS_1082

Alternate gene names: 218709076

Gene position: 1140360-1141577 (Clockwise)

Preceding gene: 218709075

Following gene: 218709077

Centisome position: 34.56

GC content: 43.43

Gene sequence:

>1218_bases
ATGGCTGGTGTATTAGGAATGATTCTTGCTGGTGGTGAAGGCTCTCGCTTAAGACCTTTAACTGAATCTCGCAGCAAACC
CTCGGTTCCTTTCGGTGGTAGTTACCGCTTAATTGATTTTGCTCTGAATAACTTCGTTAATGCTGATCTAATGAAGATCT
ACGTATTAACACAGTTTAAGTCACAATCACTGTTCCATCACATGAAAAAAGGTTGGAATATCAGTGGTATAACAGACCGT
TTTATCGACCCAATCCCTGCGCAAATGCGTACAGGTAAGCGTTGGTATGAAGGTACTGCAGATGCTATTTATCAAAACCT
TCGCTTCATGCAGTTGGAAGAACCTGATCAAGTTTGTATTTTTGGATCAGATCATATTTACAAAATGGACATTAAGCAGA
TGCTTGATTTCCATAAAGAGAAGAAAGCGGCTTTAACCGTTTCTGCATTGCGTATGCCGCTTGCTGAAGCATCTGAATTC
GGCGTTATCGAAGTGGATGCTGAAGGACGTATGATTGGTTTTGAAGAGAAACCGGCTAACCCGAAACCAATTCCAGGTGA
CCCGGAGTCTGCGCTTGTGTCTATGGGTAACTACGTATTTGAAGCTAACGAGTTGTTCGCAGAACTTGTTGAAGATGCAG
ATAAAGAAGACTCGACACATGATTTCGGAAAAGACATCATTCCAAACATGGTTCCGCGTGGTGATGTGTTTGTTTATGAC
TTCAGTACTAACCGTATTACTGGTGAGAAAGAAGAAGTTTATTGGCGCGATGTAGGTACGATTGACGCGTACTGGCAAGC
TCATATGGATCTTCTTGAGAAAGATGCGCCATTCTCGCTATACAACCGCAAGTGGCCACTACATACATACTATCCGCCAC
TACCGCCGGCTACGTTTACTGATTCGGCAAACGGCCGTGTTCAGATCATCGATAGCTTAGTGTGTAACGGCAGCTATGTA
CGTGGCTCTCGCATTGAGAAGTGTGTATTGGGTTTCCGCAGTAATATCGCATCAGCGTGTGATATTAGTGAGAGTATCTT
ACTCGGTGATGTGAAAGTGGGTGAAGGTTGCGTACTTCGTCGTGTCATCGTCGATAAAGATGCAGATATCGCACCTGGAA
CACAGATTGGCGTAAATCTGAAAGAAGATAAAAAGCATTACCATGTCTCTGACGATGGTGTAGTAGTTATTTCCAAAGGA
GCTCGAGTTGGTTACTAA

Upstream 100 bases:

>100_bases
TATTCGTTAAGTACCGAAATAAGTGTTGGTGCTCATCCCCCAGAGGAAGATACCTCTTAGAGCACTAACATCGACAAGCT
ATAAATATATGGAGAATAAA

Downstream 100 bases:

>100_bases
GACTCTCTCGGTACTTTTTGTAGCGTCTGAAGTTGAAGGCTTGATTAAAAGTGGTGGCTTGGCTGATGTAGCCAAGGCAC
TGCCAAAAGCGTTACAAACA

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase 1; ADPGlc PPase 1; ADP-glucose synthase 1 [H]

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MAGVLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMKIYVLTQFKSQSLFHHMKKGWNISGITDR
FIDPIPAQMRTGKRWYEGTADAIYQNLRFMQLEEPDQVCIFGSDHIYKMDIKQMLDFHKEKKAALTVSALRMPLAEASEF
GVIEVDAEGRMIGFEEKPANPKPIPGDPESALVSMGNYVFEANELFAELVEDADKEDSTHDFGKDIIPNMVPRGDVFVYD
FSTNRITGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFTDSANGRVQIIDSLVCNGSYV
RGSRIEKCVLGFRSNIASACDISESILLGDVKVGEGCVLRRVIVDKDADIAPGTQIGVNLKEDKKHYHVSDDGVVVISKG
ARVGY

Sequences:

>Translated_405_residues
MAGVLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMKIYVLTQFKSQSLFHHMKKGWNISGITDR
FIDPIPAQMRTGKRWYEGTADAIYQNLRFMQLEEPDQVCIFGSDHIYKMDIKQMLDFHKEKKAALTVSALRMPLAEASEF
GVIEVDAEGRMIGFEEKPANPKPIPGDPESALVSMGNYVFEANELFAELVEDADKEDSTHDFGKDIIPNMVPRGDVFVYD
FSTNRITGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFTDSANGRVQIIDSLVCNGSYV
RGSRIEKCVLGFRSNIASACDISESILLGDVKVGEGCVLRRVIVDKDADIAPGTQIGVNLKEDKKHYHVSDDGVVVISKG
ARVGY
>Mature_404_residues
AGVLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMKIYVLTQFKSQSLFHHMKKGWNISGITDRF
IDPIPAQMRTGKRWYEGTADAIYQNLRFMQLEEPDQVCIFGSDHIYKMDIKQMLDFHKEKKAALTVSALRMPLAEASEFG
VIEVDAEGRMIGFEEKPANPKPIPGDPESALVSMGNYVFEANELFAELVEDADKEDSTHDFGKDIIPNMVPRGDVFVYDF
STNRITGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFTDSANGRVQIIDSLVCNGSYVR
GSRIEKCVLGFRSNIASACDISESILLGDVKVGEGCVLRRVIVDKDADIAPGTQIGVNLKEDKKHYHVSDDGVVVISKGA
RVGY

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=399, Percent_Identity=42.1052631578947, Blast_Score=342, Evalue=4e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 45281; Mature: 45150

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMKIYVLTQFK
CCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEEEEEHHHH
SQSLFHHMKKGWNISGITDRFIDPIPAQMRTGKRWYEGTADAIYQNLRFMQLEEPDQVCI
HHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCCHHHCCCHHHHHHCCEEEEECCCCCEEE
FGSDHIYKMDIKQMLDFHKEKKAALTVSALRMPLAEASEFGVIEVDAEGRMIGFEEKPAN
ECCCCEEEECHHHHHHHHHHHHHHEEHHHHHCCHHCCCCCCEEEECCCCCEEECCCCCCC
PKPIPGDPESALVSMGNYVFEANELFAELVEDADKEDSTHDFGKDIIPNMVPRGDVFVYD
CCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEE
FSTNRITGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFT
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC
DSANGRVQIIDSLVCNGSYVRGSRIEKCVLGFRSNIASACDISESILLGDVKVGEGCVLR
CCCCCEEEEEEHHHCCCCEECCCHHHHHHHHHHHCCHHHCCCCCCEEEECEEECCCCEEE
RVIVDKDADIAPGTQIGVNLKEDKKHYHVSDDGVVVISKGARVGY
EEEECCCCCCCCCCEEECCCCCCCCEEEECCCCEEEEECCCCCCC
>Mature Secondary Structure 
AGVLGMILAGGEGSRLRPLTESRSKPSVPFGGSYRLIDFALNNFVNADLMKIYVLTQFK
CCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCEEEHHHHHHHCCCCCCEEEEEEHHHH
SQSLFHHMKKGWNISGITDRFIDPIPAQMRTGKRWYEGTADAIYQNLRFMQLEEPDQVCI
HHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCCCHHHCCCHHHHHHCCEEEEECCCCCEEE
FGSDHIYKMDIKQMLDFHKEKKAALTVSALRMPLAEASEFGVIEVDAEGRMIGFEEKPAN
ECCCCEEEECHHHHHHHHHHHHHHEEHHHHHCCHHCCCCCCEEEECCCCCEEECCCCCCC
PKPIPGDPESALVSMGNYVFEANELFAELVEDADKEDSTHDFGKDIIPNMVPRGDVFVYD
CCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEE
FSTNRITGEKEEVYWRDVGTIDAYWQAHMDLLEKDAPFSLYNRKWPLHTYYPPLPPATFT
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCC
DSANGRVQIIDSLVCNGSYVRGSRIEKCVLGFRSNIASACDISESILLGDVKVGEGCVLR
CCCCCEEEEEEHHHCCCCEECCCHHHHHHHHHHHCCHHHCCCCCCEEEECEEECCCCEEE
RVIVDKDADIAPGTQIGVNLKEDKKHYHVSDDGVVVISKGARVGY
EEEECCCCCCCCCCEEECCCCCCCCEEEECCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]