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The map label for this gene is yciN [H]

Identifier: 218709074

GI number: 218709074

Start: 1136479

End: 1136724

Strand: Reverse

Name: yciN [H]

Synonym: VS_1080

Alternate gene names: 218709074

Gene position: 1136724-1136479 (Counterclockwise)

Preceding gene: 218709079

Following gene: 218709071

Centisome position: 34.45

GC content: 36.59

Gene sequence:

>246_bases
ATGACAAAGAAAGTAATAGCAGAATTTGATTTACTGCTTATCGCAAACCAAATTATCCAATCACATGATGACTACATTGA
AGGCATGCGCGCAAACAGCGTAGTAGAAAAAGACGATGTACTCATTTTCAAAGGTGAATACTTCTTAGACAACAACGGAA
TGCCGACAGAAAATACAACCGCGGTATTTAACATGTTTAAGTACTTGGCGCATCACCTTTCGAAAGAATTTACAATTCAG
CAATAA

Upstream 100 bases:

>100_bases
TGGATGTTTGAAAAGACTCTCTTAATCGGTTGTGAAATCATTGAATTTCTAGTTCGACACCATAAACTCAACGATATATT
CAGTTATCAGAGATAAACTC

Downstream 100 bases:

>100_bases
TTAAAAAGCTTGCCATCTAGGCAAGCTTTTTTGTTCCTGGACCTTTATATACTTATCATTTTTATAGACTTAGTATTTTT
ATAGACTCAGCATTTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MTKKVIAEFDLLLIANQIIQSHDDYIEGMRANSVVEKDDVLIFKGEYFLDNNGMPTENTTAVFNMFKYLAHHLSKEFTIQ
Q

Sequences:

>Translated_81_residues
MTKKVIAEFDLLLIANQIIQSHDDYIEGMRANSVVEKDDVLIFKGEYFLDNNGMPTENTTAVFNMFKYLAHHLSKEFTIQ
Q
>Mature_80_residues
TKKVIAEFDLLLIANQIIQSHDDYIEGMRANSVVEKDDVLIFKGEYFLDNNGMPTENTTAVFNMFKYLAHHLSKEFTIQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787528, Length=67, Percent_Identity=52.2388059701493, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019633 [H]

Pfam domain/function: PF10692 DUF2498 [H]

EC number: NA

Molecular weight: Translated: 9385; Mature: 9254

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKVIAEFDLLLIANQIIQSHDDYIEGMRANSVVEKDDVLIFKGEYFLDNNGMPTENTT
CCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCHH
AVFNMFKYLAHHLSKEFTIQQ
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKKVIAEFDLLLIANQIIQSHDDYIEGMRANSVVEKDDVLIFKGEYFLDNNGMPTENTT
CCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCHH
AVFNMFKYLAHHLSKEFTIQQ
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]