| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ybaM [C]
Identifier: 218709058
GI number: 218709058
Start: 1120040
End: 1120210
Strand: Reverse
Name: ybaM [C]
Synonym: VS_1064
Alternate gene names: 218709058
Gene position: 1120210-1120040 (Counterclockwise)
Preceding gene: 218709059
Following gene: 218709057
Centisome position: 33.95
GC content: 42.11
Gene sequence:
>171_bases ATGAACACTGATAACCCATCATCACCACTGGATAACGCCCCAGAAGAAGTTAAGTTAGCTGTCGACCTGATCTATCTGCT CGAAAGCAACGAAATCGATCCAAAGGTTGCGTTAGAAGCAATTAAGATTGTCCAACAAGATTTACAAGCCAAACTAGCAT CTAGCATCTAG
Upstream 100 bases:
>100_bases GCGGACGAGGCTTGGCAATTAGCAAAAGAACGATTAGAACGCTGCGAAGACTCAATGAAAAATATTGAGAGACTGATTAA CTTAGAGAACCCCAAGCGAA
Downstream 100 bases:
>100_bases CATCTAGCATCTAGCATCTAGCATCTAGCATCTAGCATCTAGCATAAAAACATACAGGATTCACATGTACCAACTTAGCT TTTCTATGCCCGAGTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI
Sequences:
>Translated_56_residues MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI >Mature_56_residues MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6106; Mature: 6106
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTDNPSSPLDNAPEEVKLAVDLIYLLESNEIDPKVALEAIKIVQQDLQAKLASSI CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA