Click here to switch to the map view.

The map label for this gene is ybaR [H]

Identifier: 218709009

GI number: 218709009

Start: 1054024

End: 1055571

Strand: Reverse

Name: ybaR [H]

Synonym: VS_1015

Alternate gene names: 218709009

Gene position: 1055571-1054024 (Counterclockwise)

Preceding gene: 218709010

Following gene: 218709007

Centisome position: 31.99

GC content: 46.25

Gene sequence:

>1548_bases
ATGTTCGAATTCCCACAATTTTCAAAGCACTCTGTAAAAAATGATGTGCTTTCAGGTCTTACCGTAGCCTTAGCTCTGGT
ACCTGAAGCCGTAGCATTCGCCTTCGTTGCAGGCGTTGACCCAATGGTTGGTCTTTACGCAGCATTCATCGTAGGTTTAA
TTACTTCTGTCTTCGGCGGTCGTCCAGGTATGATTTCTGGTGCAACAGGCGCAATGGCTGTAGTAATGGTGAGCCTAGTA
GCAACCCACGGCGTTCAATACCTCTTTGCGGCAGTTATGCTGGCTGGCCTTCTGCAAATTGCAGCGGGTGTATTCAAGCT
AGGTAAATTTATCCGTATCGTTCCACACCCAGTAATGATTGGTTTCGTGAACGGTTTGGCTATTGTTATCTTCCTTGCTC
AGCTTGGTCAATTTAAAGCGCCAGACGTAACAGGTGCCTTAACTTGGTTACCAAGCGGTCAAATGACACTAATGCTAGGT
CTAGTAGCCCTTACAATGGCTATCATCCACTTCCTACCTAAGCTCACTACAGCAGTACCTTCTTCATTGGTAGCTATTGT
TACAGTAACAGCTTTGGTTGTAGGCCTTGATCTTGAAACTCGCACTGTTGTTGATTTCCTACGCACTATGTCTGGTGACG
AAGCTGCAACACTAGCGGGCTCTCTACCAACATTCTCTATTCCAGCAGTACCGTTTAGCCTAGAAACGCTATACATCATC
CTGCCTTACGCAGTGATTCTTGCAGCGATTGGTCTAATCGAATCACTACTAACGCTAACCGTACTAGACGAAATGACAAA
CACTCGTGGCCAATCTAACCGTGAATGTGTTGGTCAAGGTATGGCTAACGTAACTTGTTCTGTATTCGGTGCGATGGGTG
GTTGTGCGATGATCGGTCAATCGATGATCAACGTAAACTCAGGCGGTCGTGGTCGTCTTTCAGGTATCGTAGCGGCAGTT
GCACTACTGATGTTCATCCTGTTCGGCTCTGCACTGATTGAAATGATTCCTCTAGCAGCACTTGTGGGCGTAATGTTCAT
GGTTGTTATCGGTACGTTTGAATGGGCAACCTTCAAGTTGGCACGTCGCGTTCCTAAGCAAGACTTCTTCGTTATCGTTC
TTGTAACTGTCGTTACAGTACTAACAGACCTTGCGGTAGCAGTTGGTGTGGGTGTTGTAGCTTCTGCACTAATGTTTGCA
TGGCAACATGCTAAGCACATCTACGCAGACACATCGGTTAACGCTGAAGGCTCTAAAGAGTACAAAGTTAACGGTCCAAT
CTTCTTTGGTTCAACCGCTAACTTCCTTGAGTTGTTTGACTCATACAACGATCCACAAGATGTTATCGTTGATTTCGCAA
ACTCACGCGTTACTGACCACTCAGCTATTGAAGCGATCGACACGATTGCTGACCGTTACGCGGCACTAGGTAAAACACTT
CACCTTCGCCACCTAAGCCAAGACTGTGTTGCTATGCTGCACAAAGCCGGTAGCTTAGTTGAAGCGAACGTTGCAGAAGA
CCCAATCTACAAAGTAATGTCTAAGTAA

Upstream 100 bases:

>100_bases
TATATTTTCGACACTTAGCTATTGCCGCTCTTTTTCATCACTGTTTGGCTACGCAATACACTCGTGTCGGTAAACCCATT
TTAAGCATAGCTGAGCAAAC

Downstream 100 bases:

>100_bases
GCTTAGTCATAGCTTAAAGCTAGATTTAGAAAGGCCGACATTCAATGTCGGCCTTTTTTATATCGATGAACCTTGATACT
TTATCGCCCACCAAGAACAC

Product: putative sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MFEFPQFSKHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSVFGGRPGMISGATGAMAVVMVSLV
ATHGVQYLFAAVMLAGLLQIAAGVFKLGKFIRIVPHPVMIGFVNGLAIVIFLAQLGQFKAPDVTGALTWLPSGQMTLMLG
LVALTMAIIHFLPKLTTAVPSSLVAIVTVTALVVGLDLETRTVVDFLRTMSGDEAATLAGSLPTFSIPAVPFSLETLYII
LPYAVILAAIGLIESLLTLTVLDEMTNTRGQSNRECVGQGMANVTCSVFGAMGGCAMIGQSMINVNSGGRGRLSGIVAAV
ALLMFILFGSALIEMIPLAALVGVMFMVVIGTFEWATFKLARRVPKQDFFVIVLVTVVTVLTDLAVAVGVGVVASALMFA
WQHAKHIYADTSVNAEGSKEYKVNGPIFFGSTANFLELFDSYNDPQDVIVDFANSRVTDHSAIEAIDTIADRYAALGKTL
HLRHLSQDCVAMLHKAGSLVEANVAEDPIYKVMSK

Sequences:

>Translated_515_residues
MFEFPQFSKHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSVFGGRPGMISGATGAMAVVMVSLV
ATHGVQYLFAAVMLAGLLQIAAGVFKLGKFIRIVPHPVMIGFVNGLAIVIFLAQLGQFKAPDVTGALTWLPSGQMTLMLG
LVALTMAIIHFLPKLTTAVPSSLVAIVTVTALVVGLDLETRTVVDFLRTMSGDEAATLAGSLPTFSIPAVPFSLETLYII
LPYAVILAAIGLIESLLTLTVLDEMTNTRGQSNRECVGQGMANVTCSVFGAMGGCAMIGQSMINVNSGGRGRLSGIVAAV
ALLMFILFGSALIEMIPLAALVGVMFMVVIGTFEWATFKLARRVPKQDFFVIVLVTVVTVLTDLAVAVGVGVVASALMFA
WQHAKHIYADTSVNAEGSKEYKVNGPIFFGSTANFLELFDSYNDPQDVIVDFANSRVTDHSAIEAIDTIADRYAALGKTL
HLRHLSQDCVAMLHKAGSLVEANVAEDPIYKVMSK
>Mature_515_residues
MFEFPQFSKHSVKNDVLSGLTVALALVPEAVAFAFVAGVDPMVGLYAAFIVGLITSVFGGRPGMISGATGAMAVVMVSLV
ATHGVQYLFAAVMLAGLLQIAAGVFKLGKFIRIVPHPVMIGFVNGLAIVIFLAQLGQFKAPDVTGALTWLPSGQMTLMLG
LVALTMAIIHFLPKLTTAVPSSLVAIVTVTALVVGLDLETRTVVDFLRTMSGDEAATLAGSLPTFSIPAVPFSLETLYII
LPYAVILAAIGLIESLLTLTVLDEMTNTRGQSNRECVGQGMANVTCSVFGAMGGCAMIGQSMINVNSGGRGRLSGIVAAV
ALLMFILFGSALIEMIPLAALVGVMFMVVIGTFEWATFKLARRVPKQDFFVIVLVTVVTVLTDLAVAVGVGVVASALMFA
WQHAKHIYADTSVNAEGSKEYKVNGPIFFGSTANFLELFDSYNDPQDVIVDFANSRVTDHSAIEAIDTIADRYAALGKTL
HLRHLSQDCVAMLHKAGSLVEANVAEDPIYKVMSK

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI39752683, Length=489, Percent_Identity=21.881390593047, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI45827800, Length=489, Percent_Identity=21.881390593047, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI269784651, Length=598, Percent_Identity=21.2374581939799, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI45827802, Length=461, Percent_Identity=21.2581344902386, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI94721253, Length=460, Percent_Identity=20, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI94721255, Length=460, Percent_Identity=20, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI94721259, Length=460, Percent_Identity=20, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI94721257, Length=461, Percent_Identity=19.9566160520607, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI4557535, Length=503, Percent_Identity=20.675944333996, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI47131207, Length=508, Percent_Identity=21.6535433070866, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI20336272, Length=508, Percent_Identity=21.6535433070866, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87081859, Length=496, Percent_Identity=28.0241935483871, Blast_Score=155, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI86565215, Length=513, Percent_Identity=22.2222222222222, Blast_Score=89, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6325260, Length=439, Percent_Identity=21.8678815489749, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24647160, Length=429, Percent_Identity=24.4755244755245, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21355087, Length=429, Percent_Identity=24.4755244755245, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI21358633, Length=447, Percent_Identity=23.9373601789709, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19922482, Length=433, Percent_Identity=23.7875288683603, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI85815873, Length=437, Percent_Identity=23.7986270022883, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21358229, Length=141, Percent_Identity=32.6241134751773, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24651449, Length=446, Percent_Identity=22.8699551569507, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24663084, Length=127, Percent_Identity=29.1338582677165, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357695, Length=127, Percent_Identity=29.1338582677165, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 54401; Mature: 54401

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]