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The map label for this gene is asmA [H]

Identifier: 218709006

GI number: 218709006

Start: 1050362

End: 1052545

Strand: Direct

Name: asmA [H]

Synonym: VS_1012

Alternate gene names: 218709006

Gene position: 1050362-1052545 (Clockwise)

Preceding gene: 218709005

Following gene: 218709008

Centisome position: 31.84

GC content: 43.59

Gene sequence:

>2184_bases
ATGAAGAAACTACTCATTTTCATAGCTGTACCAGTGTTTGTTGTCGTTGCAGCAATTCTGGCACTAGTGCTGTTAGTGAA
TCCCAACCAATTTAAGCCATTAATTGTCGAACAAGCCCAAAAACACACAGGCCTAGAGCTCGTGATCGAGGGTGATATCA
GTTGGCAATTCTTCCCATCTATTGGCTTCGAACTTGGTCAAACTGAATTACGTAACCCTGAAGGGTTCACTCAACCAAAC
CTGTTTAAGGTTGATACGGTTGGCGTTGATGTTTCGGTTACTCCGCTATTTAGCAATCAACTAGAGATCGGCAATATCAC
TCTAGATGGTGCAGAATTTTATTTAGAAACGCTTAAAGATGGTCGCAAGAACATCGATGCGCTCACACAAGTGTCTGCTC
CTAAGGAGTCTGAACCTGCAGCGGATACAAGTTCTGAAGCAACACCGGCGCCTCAAGAGCAAACTTCTACAGACACATCT
GGCTGGACGATCAATCTTGCAGGTGTAACTGTCTCAAACGCATTGTTTGAGATGGACGACAAGCAAGCAGGTTCATTCAC
TAAGCTATACGATGTGTCTTTGAGTCTTTCTGAGTTTGCCGTTGATACATGGACGACCGCGACGTTTGCGGCTTCTGGTG
AAAACAACCAACAGAAGTTCTCTGCAAATGGCAGTGCTGAATTCAAATTAGCGGAAGGCTTTGCAAGCTACGCATTACGA
AATATTGACCTTAATGCGAAGTTCAATGATCCAGCAACGTCGATCGAGTCAGCGAAGATTGGCTTAAATACGTTTGAGTT
CGATAAGGTTAACCAACTGACTTATGCGGTGATTGGTAATGCTGCTGGTCTTGACCTTGATCTTAAAGGTGGCGGTGACT
TAACTGTCGATAGCGCGATCTCAAAAGTTACACTGAACAAGTTAACATTAGACTCAACATTCAAAGGTGAAACGCTTCCT
CAATCACCAATGAAAGTGGATATGCTGTCTGACTTAAGCTTTGATCTAACGAAGAGTCACTTGAGCTTTGTGCTAGCGAA
GCTGCAAGCTAACGCTATCGCACTAGACGGTAAAGCGGACATCACTTTATCTGAAATACCAAAGGTTCGTTTTTCTCTTC
ATAGCCCGAACATCGATTTAGATGAGTTCTTAGGCCTAGGTAATACAGAAGAAACAGCGAGCGCTGCGCCTTCTGATTCT
GCTGGTGGCTCAACTTCAAATACTACAGCTTCTTCGACGTCAAGCTCAGGTAGCTCGACTTCAAGTTCAGATAACTCGGC
TCCTGCGAAAGAAGTAGAACCTGACCTGTCAGCTCTGAAAACGCTCGATGTGAAAGGTAATATCACAATCGATAAGTTCA
AGGCGAACAACGCAAAAATGCAGAACGTGAAAACTGCGTTCTCAGTTAACCGTGGTATCGCAGATCTGACATCGTTTACC
TCGAATCTTTACCAAGGCTCTATCTCGGCAACAGCACGATTAGATGCACGCAAGACGCCAGCGACTTACACGGCTAAGAA
AAAGATTAAAGGCGTAAAAGTACAACCGTTACTGGTTGACGTAGCGAACAACGATACGCTGGAAGGTACCGGTAATATCG
ATGTTAACGTTAAAGGTAAGAGCTTGACGCCAACAGGAATCAAGAAGAACTTGGTTGGTACTATTGCGATTAACTTTGAA
GATGGTGCGGTTAATGGCATCAACATCGCGCAACTGATTAGAGAAAACTACGCTAAGATCAAAGGCGAAAAAGTCGAAAG
CAAAGACGAGTCTCAAAAGACAGATTTTAGTGCAATGAAAGCAACACTCAAGGTTGATAAAGGTTGGGTTTCAACGAATG
ACTTATCGGCACAATCGCCTCTTTTACGCGTGACAGGTCAAGGTAAAGCAAACTTCATCAATGAAACGGTCGACTTCCTG
GTTCGCACGTCAATTGTTGGTTCGCTTGAAGGCCAGGGTGGTAAGAGCATTGATGATCTCAAAGATGTGACGATTCCAAT
TAAGGTAACCGGCCAGTGGGCTGACCCGAAATTTGGGCTTATTTTTGATGATGTGTTGAAACAGAAAGCTGAAAAAGAGA
TTGATCGCGGTATTAAGAAACTTGAAGAAAAATACGGTGACAAGATCAAAGATGAGAAAACTAGAGATGCAGTCAATGGT
TTACTCAAAGGCTTGTTTAACTAA

Upstream 100 bases:

>100_bases
TAAATTTTGCCTAAGTGACTCACTTAGCTTTATTTTTTACCGAATCAGTGGCACTTTTATAGTGCCACTTTCTTTTGGAA
TCTAAGCAAGGAATATGCGG

Downstream 100 bases:

>100_bases
TCGCTATTTTAAATAAATAGCATATAAAAAGCGCCATTCCTTATTACGAGGAATGGCGCTTTTGTTTGGCTGCCGATAAT
ACCCAAGAGAGATTCCCTAT

Product: AsmA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 727; Mature: 727

Protein sequence:

>727_residues
MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPSIGFELGQTELRNPEGFTQPN
LFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKDGRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTS
GWTINLAGVTVSNALFEMDDKQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR
NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAISKVTLNKLTLDSTFKGETLP
QSPMKVDMLSDLSFDLTKSHLSFVLAKLQANAIALDGKADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSDS
AGGSTSNTTASSTSSSGSSTSSSDNSAPAKEVEPDLSALKTLDVKGNITIDKFKANNAKMQNVKTAFSVNRGIADLTSFT
SNLYQGSISATARLDARKTPATYTAKKKIKGVKVQPLLVDVANNDTLEGTGNIDVNVKGKSLTPTGIKKNLVGTIAINFE
DGAVNGINIAQLIRENYAKIKGEKVESKDESQKTDFSAMKATLKVDKGWVSTNDLSAQSPLLRVTGQGKANFINETVDFL
VRTSIVGSLEGQGGKSIDDLKDVTIPIKVTGQWADPKFGLIFDDVLKQKAEKEIDRGIKKLEEKYGDKIKDEKTRDAVNG
LLKGLFN

Sequences:

>Translated_727_residues
MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPSIGFELGQTELRNPEGFTQPN
LFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKDGRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTS
GWTINLAGVTVSNALFEMDDKQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR
NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAISKVTLNKLTLDSTFKGETLP
QSPMKVDMLSDLSFDLTKSHLSFVLAKLQANAIALDGKADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSDS
AGGSTSNTTASSTSSSGSSTSSSDNSAPAKEVEPDLSALKTLDVKGNITIDKFKANNAKMQNVKTAFSVNRGIADLTSFT
SNLYQGSISATARLDARKTPATYTAKKKIKGVKVQPLLVDVANNDTLEGTGNIDVNVKGKSLTPTGIKKNLVGTIAINFE
DGAVNGINIAQLIRENYAKIKGEKVESKDESQKTDFSAMKATLKVDKGWVSTNDLSAQSPLLRVTGQGKANFINETVDFL
VRTSIVGSLEGQGGKSIDDLKDVTIPIKVTGQWADPKFGLIFDDVLKQKAEKEIDRGIKKLEEKYGDKIKDEKTRDAVNG
LLKGLFN
>Mature_727_residues
MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPSIGFELGQTELRNPEGFTQPN
LFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKDGRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTS
GWTINLAGVTVSNALFEMDDKQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR
NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAISKVTLNKLTLDSTFKGETLP
QSPMKVDMLSDLSFDLTKSHLSFVLAKLQANAIALDGKADITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSDS
AGGSTSNTTASSTSSSGSSTSSSDNSAPAKEVEPDLSALKTLDVKGNITIDKFKANNAKMQNVKTAFSVNRGIADLTSFT
SNLYQGSISATARLDARKTPATYTAKKKIKGVKVQPLLVDVANNDTLEGTGNIDVNVKGKSLTPTGIKKNLVGTIAINFE
DGAVNGINIAQLIRENYAKIKGEKVESKDESQKTDFSAMKATLKVDKGWVSTNDLSAQSPLLRVTGQGKANFINETVDFL
VRTSIVGSLEGQGGKSIDDLKDVTIPIKVTGQWADPKFGLIFDDVLKQKAEKEIDRGIKKLEEKYGDKIKDEKTRDAVNG
LLKGLFN

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=712, Percent_Identity=23.0337078651685, Blast_Score=159, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 77880; Mature: 77880

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS
CCEEEEEHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCCEEEEEECCCCEEECCC
IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD
CCCCCCHHHCCCCCCCCCCCEEEEEEECEEEEEEEEECCCEEECEEEECHHHHHHHHHHH
GRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTSGWTINLAGVTVSNALFEMDD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCHHEECCC
KQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR
CCCCCEEEEEEEEEEHHHHHHHCCCEEEEEECCCCCCEEECCCCCCEEEEHHHHHHHHEE
NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAI
EEEECCCCCCCCCCCCHHEECCCEECCCCCCCEEEEEECCCCCCEEEECCCCCEEHHHHH
SKVTLNKLTLDSTFKGETLPQSPMKVDMLSDLSFDLTKSHLSFVLAKLQANAIALDGKAD
HHEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCC
ITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSDSAGGSTSNTTASSTSSSGSST
EEHHHCCCEEEEECCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSSDNSAPAKEVEPDLSALKTLDVKGNITIDKFKANNAKMQNVKTAFSVNRGIADLTSFT
CCCCCCCCHHHCCCCHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHH
SNLYQGSISATARLDARKTPATYTAKKKIKGVKVQPLLVDVANNDTLEGTGNIDVNVKGK
HHHHCCCCCEEEEECCCCCCCCEEHHHHCCCEEEEEEEEEECCCCEECCCCCEEEEEECC
SLTPTGIKKNLVGTIAINFEDGAVNGINIAQLIRENYAKIKGEKVESKDESQKTDFSAMK
CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ATLKVDKGWVSTNDLSAQSPLLRVTGQGKANFINETVDFLVRTSIVGSLEGQGGKSIDDL
EEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
KDVTIPIKVTGQWADPKFGLIFDDVLKQKAEKEIDRGIKKLEEKYGDKIKDEKTRDAVNG
HCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LLKGLFN
HHHHHCC
>Mature Secondary Structure
MKKLLIFIAVPVFVVVAAILALVLLVNPNQFKPLIVEQAQKHTGLELVIEGDISWQFFPS
CCEEEEEHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCCCEEEEEECCCCEEECCC
IGFELGQTELRNPEGFTQPNLFKVDTVGVDVSVTPLFSNQLEIGNITLDGAEFYLETLKD
CCCCCCHHHCCCCCCCCCCCEEEEEEECEEEEEEEEECCCEEECEEEECHHHHHHHHHHH
GRKNIDALTQVSAPKESEPAADTSSEATPAPQEQTSTDTSGWTINLAGVTVSNALFEMDD
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEECCHHEECCC
KQAGSFTKLYDVSLSLSEFAVDTWTTATFAASGENNQQKFSANGSAEFKLAEGFASYALR
CCCCCEEEEEEEEEEHHHHHHHCCCEEEEEECCCCCCEEECCCCCCEEEEHHHHHHHHEE
NIDLNAKFNDPATSIESAKIGLNTFEFDKVNQLTYAVIGNAAGLDLDLKGGGDLTVDSAI
EEEECCCCCCCCCCCCHHEECCCEECCCCCCCEEEEEECCCCCCEEEECCCCCEEHHHHH
SKVTLNKLTLDSTFKGETLPQSPMKVDMLSDLSFDLTKSHLSFVLAKLQANAIALDGKAD
HHEEEEEEEECCCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCC
ITLSEIPKVRFSLHSPNIDLDEFLGLGNTEETASAAPSDSAGGSTSNTTASSTSSSGSST
EEHHHCCCEEEEECCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SSSDNSAPAKEVEPDLSALKTLDVKGNITIDKFKANNAKMQNVKTAFSVNRGIADLTSFT
CCCCCCCCHHHCCCCHHHHEEECCCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHH
SNLYQGSISATARLDARKTPATYTAKKKIKGVKVQPLLVDVANNDTLEGTGNIDVNVKGK
HHHHCCCCCEEEEECCCCCCCCEEHHHHCCCEEEEEEEEEECCCCEECCCCCEEEEEECC
SLTPTGIKKNLVGTIAINFEDGAVNGINIAQLIRENYAKIKGEKVESKDESQKTDFSAMK
CCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ATLKVDKGWVSTNDLSAQSPLLRVTGQGKANFINETVDFLVRTSIVGSLEGQGGKSIDDL
EEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
KDVTIPIKVTGQWADPKFGLIFDDVLKQKAEKEIDRGIKKLEEKYGDKIKDEKTRDAVNG
HCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LLKGLFN
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]