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The map label for this gene is dsbB [H]

Identifier: 218708999

GI number: 218708999

Start: 1041429

End: 1041953

Strand: Reverse

Name: dsbB [H]

Synonym: VS_1005

Alternate gene names: 218708999

Gene position: 1041953-1041429 (Counterclockwise)

Preceding gene: 218709000

Following gene: 218708997

Centisome position: 31.58

GC content: 45.9

Gene sequence:

>525_bases
GTGAACTTTTTTGCAATGCTCAAAGACTTCTCTAAGGGACGTTTATCTTGGCTTTTACTGCTGGCTTTTATTGTCTTTTT
TGAAGCATGTGCTCTTTTCTTTCAGCACGTAATGATGCTTGGCCCTTGTGTAATGTGTATCTACGAGCGCGTTGCTATGC
TCGCTATCGGCATCGCAGCAATGATTGGTGCTATTGCCCCGCATAATCCGATATCACGTTGGCTAGGTCTACTTGGTTGG
GGGTTAGGTGCGTATAAAGGGTTGATGCTTGCTTTAGAGCACGTTGACTACCAGTTTAACCCGTCTCCTTTCGCTACCTG
TGACCTGTTCGTGACCTTCCCTACCTGGGCACCTCTAAACCAATGGGCTCCGTGGATGTTTGAGGCCTACGGCGACTGCA
GCAAGGTAGTATGGCAGTTCTTAGAACTTTCAATGCCTCAATGGCTAGTGATTATCTTCGCGGGTAACTTGGTTGCTTTC
GGTTTTGTAGTGATTTCTCAATTCGTTAAATCGAAGAATGACTAA

Upstream 100 bases:

>100_bases
CATCTAACTAATCAAAAATATTAGTTGATTAGGAAACTTATCCAAGATAAAAAGCTCTGAGTAATCAGGGCTTTTTTATT
TTATTGACAGGATTAAATTC

Downstream 100 bases:

>100_bases
CAATTAGCACATCATGTTAAGAAACGAAAAAGTCGACATTACGTCGACTTTTTATTATCTATTAACAATGCAATTAAGAT
TTTTTACCACAGCACTGTTT

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MNFFAMLKDFSKGRLSWLLLLAFIVFFEACALFFQHVMMLGPCVMCIYERVAMLAIGIAAMIGAIAPHNPISRWLGLLGW
GLGAYKGLMLALEHVDYQFNPSPFATCDLFVTFPTWAPLNQWAPWMFEAYGDCSKVVWQFLELSMPQWLVIIFAGNLVAF
GFVVISQFVKSKND

Sequences:

>Translated_174_residues
MNFFAMLKDFSKGRLSWLLLLAFIVFFEACALFFQHVMMLGPCVMCIYERVAMLAIGIAAMIGAIAPHNPISRWLGLLGW
GLGAYKGLMLALEHVDYQFNPSPFATCDLFVTFPTWAPLNQWAPWMFEAYGDCSKVVWQFLELSMPQWLVIIFAGNLVAF
GFVVISQFVKSKND
>Mature_174_residues
MNFFAMLKDFSKGRLSWLLLLAFIVFFEACALFFQHVMMLGPCVMCIYERVAMLAIGIAAMIGAIAPHNPISRWLGLLGW
GLGAYKGLMLALEHVDYQFNPSPFATCDLFVTFPTWAPLNQWAPWMFEAYGDCSKVVWQFLELSMPQWLVIIFAGNLVAF
GFVVISQFVKSKND

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

Organism=Escherichia coli, GI1787433, Length=167, Percent_Identity=49.1017964071856, Blast_Score=161, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 19709; Mature: 19709

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFAMLKDFSKGRLSWLLLLAFIVFFEACALFFQHVMMLGPCVMCIYERVAMLAIGIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIGAIAPHNPISRWLGLLGWGLGAYKGLMLALEHVDYQFNPSPFATCDLFVTFPTWAPLN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH
QWAPWMFEAYGDCSKVVWQFLELSMPQWLVIIFAGNLVAFGFVVISQFVKSKND
HCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNFFAMLKDFSKGRLSWLLLLAFIVFFEACALFFQHVMMLGPCVMCIYERVAMLAIGIAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MIGAIAPHNPISRWLGLLGWGLGAYKGLMLALEHVDYQFNPSPFATCDLFVTFPTWAPLN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH
QWAPWMFEAYGDCSKVVWQFLELSMPQWLVIIFAGNLVAFGFVVISQFVKSKND
HCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]