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The map label for this gene is ybhK [C]

Identifier: 218708978

GI number: 218708978

Start: 1017110

End: 1017997

Strand: Reverse

Name: ybhK [C]

Synonym: VS_0984

Alternate gene names: 218708978

Gene position: 1017997-1017110 (Counterclockwise)

Preceding gene: 218708990

Following gene: 218708974

Centisome position: 30.85

GC content: 47.97

Gene sequence:

>888_bases
ATGAATATTTACTCTTCAAAAAAAGTGGTCGCAATTGGTGGTGGTCACGGCTTAGGTCGTATGCTTGCGGCATTAAAAGA
CTTTGGTAGCAATGCGACAGGCATTGTTGCAACCACAGATAACGGTGGATCAACCGGGCGTATTCGAGATTGCCAAGGTG
GCATCGCTTGGGGTGATACTCGTAACTGTATCAACCAACTAATCACCGAGCCTTCGATCAGTTCGATGATGTTCGAATAC
CGCTTTCGCGGTCAAGGTGAACTCGATGGTCACAACCTCGGAAACCTGATGCTGACTGCGCTAGACAACCTTTCTGTTCG
CCCATTGGAAGCCATCAACCTGATTCGTAACATGCTTAAGGTCGATGTGAATATTGTGCCAATGACGGAACATCCTTCCG
ATCTTACCGCTTTGTCAATGGACGGCCGTTGGGTTACGGGTGAAACCAACGTTGATGACATGACAGAAAAACTGCGCATG
ATGGACTTGTCTCCAGAAGTGCCTGCGACTAAAGAAGCCGTTGCAGCTGTCGAACAAGCAGACTGTATCGTGCTTGGTCC
GGGAAGTTTTCTAACCAGTGTTATGCCGCCCCTTCTACTGCCAGAGATTGGTAAAGCGATCGCAGATAATACTAAAGCCA
AGGTTATCTTCGTTGAAAACCTGTCGCCAGAGCATGGACCTGCAGGGAAAATGACGCTACAAGAGCAATTGGAGTGGTGT
GAACGTACCTGCAAGACAAGAAAAATCGACATTGTATTGGGTAACGCGCCCCATCCGGAACTTGAAGGGCTATGGAATTG
CGTGACTACTGACCTTGCCTCTCCAAATAGAGATTGGAGACACGACCGCGTAAAACTCCAACAAGCAATTAGGGATCAGT
TGGTTTAA

Upstream 100 bases:

>100_bases
AAAAAAAACGTATCAAACCCTCAAAATAACTCTTGTTGAGTATCTGACGAGAAGCATTTAACCTAAATTATAGTTGGTAA
TAATCTAACAAGAACAAAAA

Downstream 100 bases:

>100_bases
CTCGATTTTCTGAATCTATTTACCAAACAAAAACAAAAAGGAGCACGATGCTCCTTTTTAAGTTCATTGATGACTGACCA
CTTTAGAGCTCTGTCATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNIYSSKKVVAIGGGHGLGRMLAALKDFGSNATGIVATTDNGGSTGRIRDCQGGIAWGDTRNCINQLITEPSISSMMFEY
RFRGQGELDGHNLGNLMLTALDNLSVRPLEAINLIRNMLKVDVNIVPMTEHPSDLTALSMDGRWVTGETNVDDMTEKLRM
MDLSPEVPATKEAVAAVEQADCIVLGPGSFLTSVMPPLLLPEIGKAIADNTKAKVIFVENLSPEHGPAGKMTLQEQLEWC
ERTCKTRKIDIVLGNAPHPELEGLWNCVTTDLASPNRDWRHDRVKLQQAIRDQLV

Sequences:

>Translated_295_residues
MNIYSSKKVVAIGGGHGLGRMLAALKDFGSNATGIVATTDNGGSTGRIRDCQGGIAWGDTRNCINQLITEPSISSMMFEY
RFRGQGELDGHNLGNLMLTALDNLSVRPLEAINLIRNMLKVDVNIVPMTEHPSDLTALSMDGRWVTGETNVDDMTEKLRM
MDLSPEVPATKEAVAAVEQADCIVLGPGSFLTSVMPPLLLPEIGKAIADNTKAKVIFVENLSPEHGPAGKMTLQEQLEWC
ERTCKTRKIDIVLGNAPHPELEGLWNCVTTDLASPNRDWRHDRVKLQQAIRDQLV
>Mature_295_residues
MNIYSSKKVVAIGGGHGLGRMLAALKDFGSNATGIVATTDNGGSTGRIRDCQGGIAWGDTRNCINQLITEPSISSMMFEY
RFRGQGELDGHNLGNLMLTALDNLSVRPLEAINLIRNMLKVDVNIVPMTEHPSDLTALSMDGRWVTGETNVDDMTEKLRM
MDLSPEVPATKEAVAAVEQADCIVLGPGSFLTSVMPPLLLPEIGKAIADNTKAKVIFVENLSPEHGPAGKMTLQEQLEWC
ERTCKTRKIDIVLGNAPHPELEGLWNCVTTDLASPNRDWRHDRVKLQQAIRDQLV

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=290, Percent_Identity=53.448275862069, Blast_Score=285, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 32216; Mature: 32216

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYSSKKVVAIGGGHGLGRMLAALKDFGSNATGIVATTDNGGSTGRIRDCQGGIAWGDT
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCH
RNCINQLITEPSISSMMFEYRFRGQGELDGHNLGNLMLTALDNLSVRPLEAINLIRNMLK
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VDVNIVPMTEHPSDLTALSMDGRWVTGETNVDDMTEKLRMMDLSPEVPATKEAVAAVEQA
HCCEEEECCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
DCIVLGPGSFLTSVMPPLLLPEIGKAIADNTKAKVIFVENLSPEHGPAGKMTLQEQLEWC
CEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
ERTCKTRKIDIVLGNAPHPELEGLWNCVTTDLASPNRDWRHDRVKLQQAIRDQLV
HHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYSSKKVVAIGGGHGLGRMLAALKDFGSNATGIVATTDNGGSTGRIRDCQGGIAWGDT
CCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCCCCCCH
RNCINQLITEPSISSMMFEYRFRGQGELDGHNLGNLMLTALDNLSVRPLEAINLIRNMLK
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VDVNIVPMTEHPSDLTALSMDGRWVTGETNVDDMTEKLRMMDLSPEVPATKEAVAAVEQA
HCCEEEECCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
DCIVLGPGSFLTSVMPPLLLPEIGKAIADNTKAKVIFVENLSPEHGPAGKMTLQEQLEWC
CEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
ERTCKTRKIDIVLGNAPHPELEGLWNCVTTDLASPNRDWRHDRVKLQQAIRDQLV
HHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]