Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708952

Identifier: 218708952

GI number: 218708952

Start: 985390

End: 986262

Strand: Reverse

Name: 218708952

Synonym: VS_0956

Alternate gene names: NA

Gene position: 986262-985390 (Counterclockwise)

Preceding gene: 218708953

Following gene: 218708950

Centisome position: 29.89

GC content: 44.67

Gene sequence:

>873_bases
ATGCATTTAACAAAAGATGAATCTCTCCTTATGTCACGCAAGCCCCTCAAGCATCATTTGTACGTCATTATCTTTGGTAC
TCACACGCCAGCCGGACGTGCATTTGATATTTCTCTGATCGTTGCAATCTTGGCTTCGCTATTGGTTCTGATCTTAGAGT
CCATCCCTAATGTCATGACCGAATGGTCACAGCAGCTGCGTTATATTGAATACACTTTTACTGCTCTCTTCACTCTTGAG
TATTTGTTAAGGCTCTATTGTTCTCCGAAACCAAAATCTTATGCCACCAGCTTTTATGGTGTCGTGGACCTATTGGCGAT
TCTTCCGACCTACTTAGCGATCATCTTCCCAGGCGCTTCATTTATGGGTGTGGTAAGGCTGCTGCGTGTGATGCGTATCT
TCCGAATCCTAAAACTGGTTCGCTACCTGCAAGATTCAAACATTCTGTTACGTTCACTTTTAATGGCAAGACGAAAGATA
CTGATCTTTTTCAGCACAGTGGGCATCTTAGTTGTTATCTTCGGCGCGCTTATCTTTGTTATTGAAGGGCCAGAAAATGG
CTTTACAAGTATTCCCCACAGTATTTATTGGGCAATCGTAACCATTACGACGGTTGGCTACGGTGACATGATCCCTCAAA
CCACGTTAGGGAAAGCGATCGCTTCTCTGACCATGCTATTGGGTTACTCTATTTTAGCGGTACCGACAGGGATTATTACT
GCAGAGCTCAGCAATGAGATGAACTCGCACAAAGAGTTGGTAAAGTGTCCGAACTGTAACCGCGCCGGCCATGATTCGGA
TGCTATGTATTGCAAACACTGTGCGAGTGAATTGGCAGACCCCGACAAGCGTGTCGTTACAGAAGAGAAATAA

Upstream 100 bases:

>100_bases
TGCTCTATAAAGGGCAACAATATTGCAATATAGATGAGGCGAGTAAAGCAATTGGGCTTTCACTCGCCTCGTTATTATGA
AGCTTGTATAATGACTGTTA

Downstream 100 bases:

>100_bases
AAGCAGACTCGAGATGCGAAGAGGTTTAAGGGCAGTTTCGAGGGCCGAATAACGAGATATCAATAAACTAAAAAGGGTTG
ACGTTTATCGTCAACCCTTT

Product: putative potassium channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MHLTKDESLLMSRKPLKHHLYVIIFGTHTPAGRAFDISLIVAILASLLVLILESIPNVMTEWSQQLRYIEYTFTALFTLE
YLLRLYCSPKPKSYATSFYGVVDLLAILPTYLAIIFPGASFMGVVRLLRVMRIFRILKLVRYLQDSNILLRSLLMARRKI
LIFFSTVGILVVIFGALIFVIEGPENGFTSIPHSIYWAIVTITTVGYGDMIPQTTLGKAIASLTMLLGYSILAVPTGIIT
AELSNEMNSHKELVKCPNCNRAGHDSDAMYCKHCASELADPDKRVVTEEK

Sequences:

>Translated_290_residues
MHLTKDESLLMSRKPLKHHLYVIIFGTHTPAGRAFDISLIVAILASLLVLILESIPNVMTEWSQQLRYIEYTFTALFTLE
YLLRLYCSPKPKSYATSFYGVVDLLAILPTYLAIIFPGASFMGVVRLLRVMRIFRILKLVRYLQDSNILLRSLLMARRKI
LIFFSTVGILVVIFGALIFVIEGPENGFTSIPHSIYWAIVTITTVGYGDMIPQTTLGKAIASLTMLLGYSILAVPTGIIT
AELSNEMNSHKELVKCPNCNRAGHDSDAMYCKHCASELADPDKRVVTEEK
>Mature_290_residues
MHLTKDESLLMSRKPLKHHLYVIIFGTHTPAGRAFDISLIVAILASLLVLILESIPNVMTEWSQQLRYIEYTFTALFTLE
YLLRLYCSPKPKSYATSFYGVVDLLAILPTYLAIIFPGASFMGVVRLLRVMRIFRILKLVRYLQDSNILLRSLLMARRKI
LIFFSTVGILVVIFGALIFVIEGPENGFTSIPHSIYWAIVTITTVGYGDMIPQTTLGKAIASLTMLLGYSILAVPTGIIT
AELSNEMNSHKELVKCPNCNRAGHDSDAMYCKHCASELADPDKRVVTEEK

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI20070166, Length=210, Percent_Identity=37.6190476190476, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI27436974, Length=248, Percent_Identity=36.6935483870968, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI4826784, Length=240, Percent_Identity=36.6666666666667, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI88758565, Length=332, Percent_Identity=23.7951807228916, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI27436986, Length=215, Percent_Identity=31.6279069767442, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI27436984, Length=215, Percent_Identity=31.6279069767442, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI45383011, Length=239, Percent_Identity=31.7991631799163, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI27436981, Length=183, Percent_Identity=34.4262295081967, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI19424136, Length=244, Percent_Identity=33.1967213114754, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI9789987, Length=172, Percent_Identity=34.8837209302326, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI4826782, Length=206, Percent_Identity=30.0970873786408, Blast_Score=107, Evalue=8e-24,
Organism=Homo sapiens, GI25952108, Length=237, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI25952087, Length=314, Percent_Identity=25.1592356687898, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI25952092, Length=238, Percent_Identity=32.3529411764706, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI119395748, Length=277, Percent_Identity=25.6317689530686, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI13492973, Length=199, Percent_Identity=32.6633165829146, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI4504817, Length=208, Percent_Identity=30.2884615384615, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI27436988, Length=256, Percent_Identity=32.421875, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI88758576, Length=191, Percent_Identity=32.4607329842932, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI24497462, Length=191, Percent_Identity=32.4607329842932, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI4504821, Length=191, Percent_Identity=30.8900523560209, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI24497460, Length=204, Percent_Identity=32.3529411764706, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI24497458, Length=196, Percent_Identity=31.6326530612245, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI21217561, Length=196, Percent_Identity=31.6326530612245, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI21217563, Length=196, Percent_Identity=31.6326530612245, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI5031819, Length=188, Percent_Identity=31.3829787234043, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI163792201, Length=191, Percent_Identity=31.9371727748691, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4826786, Length=191, Percent_Identity=31.9371727748691, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI26638655, Length=267, Percent_Identity=26.9662921348315, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI27436996, Length=280, Percent_Identity=27.1428571428571, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI26638653, Length=267, Percent_Identity=26.9662921348315, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI27436993, Length=187, Percent_Identity=32.0855614973262, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI19071574, Length=185, Percent_Identity=31.8918918918919, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI7657289, Length=233, Percent_Identity=33.0472103004292, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI236462242, Length=263, Percent_Identity=26.2357414448669, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI236461942, Length=261, Percent_Identity=26.4367816091954, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI236461719, Length=261, Percent_Identity=26.4367816091954, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI236462079, Length=261, Percent_Identity=26.4367816091954, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI28373065, Length=261, Percent_Identity=26.4367816091954, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI26051264, Length=241, Percent_Identity=27.3858921161826, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI6912444, Length=249, Percent_Identity=26.1044176706827, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI26051268, Length=263, Percent_Identity=26.615969581749, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI26051266, Length=263, Percent_Identity=26.615969581749, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI26051260, Length=261, Percent_Identity=26.8199233716475, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI26051262, Length=261, Percent_Identity=26.8199233716475, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI32479527, Length=238, Percent_Identity=26.0504201680672, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI32479525, Length=219, Percent_Identity=28.310502283105, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI4758630, Length=167, Percent_Identity=29.940119760479, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71989381, Length=186, Percent_Identity=37.6344086021505, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI71989376, Length=186, Percent_Identity=37.6344086021505, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71989369, Length=186, Percent_Identity=37.6344086021505, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71989361, Length=186, Percent_Identity=37.6344086021505, Blast_Score=116, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17544122, Length=214, Percent_Identity=31.3084112149533, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71994313, Length=238, Percent_Identity=32.7731092436975, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71994320, Length=221, Percent_Identity=32.579185520362, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193206869, Length=205, Percent_Identity=30.7317073170732, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17569273, Length=219, Percent_Identity=30.5936073059361, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI25148255, Length=205, Percent_Identity=30.7317073170732, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71994134, Length=249, Percent_Identity=32.9317269076305, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI25147238, Length=230, Percent_Identity=26.5217391304348, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25147242, Length=230, Percent_Identity=26.5217391304348, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI32564088, Length=202, Percent_Identity=27.7227722772277, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564084, Length=203, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564080, Length=203, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564076, Length=203, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564086, Length=203, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564090, Length=203, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564082, Length=203, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71986574, Length=201, Percent_Identity=26.865671641791, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71986008, Length=199, Percent_Identity=33.1658291457286, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71986003, Length=199, Percent_Identity=33.1658291457286, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71986011, Length=199, Percent_Identity=33.1658291457286, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71985535, Length=194, Percent_Identity=34.020618556701, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193207406, Length=200, Percent_Identity=33.5, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI72000220, Length=213, Percent_Identity=28.169014084507, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI32564068, Length=209, Percent_Identity=32.0574162679426, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71998749, Length=209, Percent_Identity=32.0574162679426, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115532628, Length=209, Percent_Identity=32.0574162679426, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564074, Length=209, Percent_Identity=32.0574162679426, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564072, Length=209, Percent_Identity=32.0574162679426, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564070, Length=209, Percent_Identity=32.0574162679426, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI32564066, Length=227, Percent_Identity=25.9911894273128, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281365536, Length=267, Percent_Identity=32.2097378277154, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI116007764, Length=267, Percent_Identity=32.2097378277154, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24656294, Length=267, Percent_Identity=32.2097378277154, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24656289, Length=256, Percent_Identity=33.203125, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI161084970, Length=172, Percent_Identity=35.4651162790698, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17737641, Length=172, Percent_Identity=35.4651162790698, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI17136468, Length=202, Percent_Identity=30.1980198019802, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI221330674, Length=202, Percent_Identity=30.1980198019802, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24642916, Length=219, Percent_Identity=31.0502283105023, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28574020, Length=202, Percent_Identity=30.1980198019802, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24642914, Length=219, Percent_Identity=31.0502283105023, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI45555859, Length=213, Percent_Identity=30.9859154929577, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45549143, Length=213, Percent_Identity=30.9859154929577, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24642910, Length=213, Percent_Identity=30.9859154929577, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI161076829, Length=181, Percent_Identity=29.8342541436464, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI221330119, Length=222, Percent_Identity=28.3783783783784, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221330117, Length=222, Percent_Identity=28.3783783783784, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281363095, Length=222, Percent_Identity=28.3783783783784, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281363097, Length=222, Percent_Identity=28.3783783783784, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 32523; Mature: 32523

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MHLTKDESLLMSRKPLKHHLYVIIFGTHTPAGRAFDISLIVAILASLLVLILESIPNVMT
CCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWSQQLRYIEYTFTALFTLEYLLRLYCSPKPKSYATSFYGVVDLLAILPTYLAIIFPGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FMGVVRLLRVMRIFRILKLVRYLQDSNILLRSLLMARRKILIFFSTVGILVVIFGALIFV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IEGPENGFTSIPHSIYWAIVTITTVGYGDMIPQTTLGKAIASLTMLLGYSILAVPTGIIT
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELSNEMNSHKELVKCPNCNRAGHDSDAMYCKHCASELADPDKRVVTEEK
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHLTKDESLLMSRKPLKHHLYVIIFGTHTPAGRAFDISLIVAILASLLVLILESIPNVMT
CCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWSQQLRYIEYTFTALFTLEYLLRLYCSPKPKSYATSFYGVVDLLAILPTYLAIIFPGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH
FMGVVRLLRVMRIFRILKLVRYLQDSNILLRSLLMARRKILIFFSTVGILVVIFGALIFV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
IEGPENGFTSIPHSIYWAIVTITTVGYGDMIPQTTLGKAIASLTMLLGYSILAVPTGIIT
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AELSNEMNSHKELVKCPNCNRAGHDSDAMYCKHCASELADPDKRVVTEEK
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]