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The map label for this gene is mcp1 [H]

Identifier: 218708927

GI number: 218708927

Start: 955196

End: 957232

Strand: Reverse

Name: mcp1 [H]

Synonym: VS_0929

Alternate gene names: 218708927

Gene position: 957232-955196 (Counterclockwise)

Preceding gene: 218708928

Following gene: 218708926

Centisome position: 29.01

GC content: 45.61

Gene sequence:

>2037_bases
ATGTTCGAGAAATACAAAAATCAAAGTGTTGGCTTCCAACTTAAGTTGGTCATTTTGCTGTGCTTACTTATCGCCTTTGG
CTCTATCGCAACGCTCGTGTATCGCAATGCCTCACAAGTATTATTAGACAACACGTTAAGGGAACACCAATCCAAAGTAG
AAGCGATGGCCAAAACCATATCTGGCCAATTCGATGCCTACCTGCATACCGCCAAAGTTTTAGAATCCACCTTTCGTAAC
GGTTACCTAGCAGGTGTTTATGTTGAGAATTACGACGTTGAGTTCAACGGTCATTCCATTCCTAACCTGACTCAATATGG
TGAGAGCCTAATCAACGACACTAAACTCGTTGATAGCTTTACTCGCGACACCGGCGCTGTAGCAACCCTATTTGCCCCAT
TTGGCGATGACTTTATTCGCGTGTCTACTTCTCTTAAAAAACCGTCAGGGGAACGTGTTGTTGCCACAACGTTAGGCAAG
GATCATCCTGGCTATAACAAACTCAAAAATGGCCAAGCTTATTACGCGCAAGTGAAGCTCTTCGGCCAACGCTACATTAC
CTACTACGCGCCTTTAACGAATGCACAAGGCAAAGTTAACGGTGTCTCTTTCATTGGTCTACCCGTAGAAGAGGCGACAC
AAAACCTGTTCGAGTCATTGCGTTCTGTCTCATGGGGCGATACTGGCTATACCATCATCGTTGACAATGAAGAAGAGCAT
CAAGGCCAGTACTTACTGCACCCTACTAATGCTGGAGGTGATAAATCTATTGTGGATGTTGCCGACTACGACGGTAACAA
ACCTTTCTATCAGCTCTTTGAGCAGCCATCCGGCTTGATTCTCTACCCTTTTGAGTATCAAGGAACAGTGGGCGAAAAAT
ACCTCGTCTATACCGAAGTCCCGGGGTGGAATTGGAAACTACTTGGCGGCACATTTATTAATGAAGTCACTAAAGGCAGC
GATGAACTGCTGAAACTTATCGCGATAATCGCGACCTTGATTGCCGCCGCTACCATCGTCGTATTAACGCTCGTATTGAA
CCGTACGTTGACGCCGTTAACGACTTTAAACGAATACATGATGCGCTTAGGAAAAGGCGAAGTCAGCTTACATATTCCAA
ACAACGGCAAACAGACTAAGAATGAAATCAGCAACCTAAATACCGGCGTTGCGAATATGGCTGCTCAATTGAATACACTC
GTTGGAGAAATTCGTACGACCAGTGATCAAGTACAAAACAGCTCTAGCAGTGTGTCACAGGATGCTAGCCACAATCTGAG
CCAATCTGACCGCCAACAAGCACAGGTTGAGCAAGTCGTTACCGCTATTGAAGAGATGGCTACCTCGGCAGAATCTGTAG
CGCAGCAAGTGAATAGCATTGCTGAAAATGTTCGCCTTGCAAATGAAGACAGCCAGAAAGGTTTAGAAGTCGTTGAAGGT
GTGTGTATTGATGTTGCCCAGCTAAATGATCAATTAGACAAATCAGCATCGGCCATCGAGCAAGTGAGTTCTGATAGCGA
AAGCATTCAAACCGTCACCAAAATGATTGATGACATCGCAGAACAAACCAACTTACTTGCGTTGAACGCTGCAATAGAAG
CAGCGCGAGCGGGTGATCAGGGGCGTGGTTTTGCCGTGGTCGCTGACGAAGTAAGAACATTGGCTCATCGTACACAAACG
TCAGTACAAGACGTAGTGAGCATCATCGAGAAGTTGAAATCTTCAACTAACAATGCCGTGAACCTGATGACACAAAGCCA
ATCAAATGCCAACCAAGTACTTGATAAAGCGCAAGAAGCAGGCACAGCCCTAGAGTCGATTGCCTCTCAAGTTGAATCTA
TTGCCTCTCAAGCTGAAACCATTGCTGCGACATCAGAAGAGCAAGCTCAGGTTTCTCAAGAAATAGCAGCGAACGCGCAT
GCGATCAGCGATTTGAACCAGCAAAGCCGTGAAACCAGCGCTAAGACTTCTCACAGTGCTGATGAACTTCAAAAACAAGC
TGAGTCGTTAAAGAACCAAGTTAACTTCTTTAGCTAG

Upstream 100 bases:

>100_bases
CAATTACTGCCTATGAATAAGTTCTTATGATAGGAGGCTCAATAACAAACTTATCTAAAACCACTTAACAACACCTCAAT
GAAGACAGGATAATGAATTC

Downstream 100 bases:

>100_bases
AAGCCGAGTTCACTGTTTCTATGTGACTTGCTCATGACCAATAGAGCCAACCATACGTTGGCTCTATCTCTTCACTGACA
GCCTCTGTATCTTCACTAAT

Product: putative methyl-accepting chemotaxis protein 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 678; Mature: 678

Protein sequence:

>678_residues
MFEKYKNQSVGFQLKLVILLCLLIAFGSIATLVYRNASQVLLDNTLREHQSKVEAMAKTISGQFDAYLHTAKVLESTFRN
GYLAGVYVENYDVEFNGHSIPNLTQYGESLINDTKLVDSFTRDTGAVATLFAPFGDDFIRVSTSLKKPSGERVVATTLGK
DHPGYNKLKNGQAYYAQVKLFGQRYITYYAPLTNAQGKVNGVSFIGLPVEEATQNLFESLRSVSWGDTGYTIIVDNEEEH
QGQYLLHPTNAGGDKSIVDVADYDGNKPFYQLFEQPSGLILYPFEYQGTVGEKYLVYTEVPGWNWKLLGGTFINEVTKGS
DELLKLIAIIATLIAAATIVVLTLVLNRTLTPLTTLNEYMMRLGKGEVSLHIPNNGKQTKNEISNLNTGVANMAAQLNTL
VGEIRTTSDQVQNSSSSVSQDASHNLSQSDRQQAQVEQVVTAIEEMATSAESVAQQVNSIAENVRLANEDSQKGLEVVEG
VCIDVAQLNDQLDKSASAIEQVSSDSESIQTVTKMIDDIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRTLAHRTQT
SVQDVVSIIEKLKSSTNNAVNLMTQSQSNANQVLDKAQEAGTALESIASQVESIASQAETIAATSEEQAQVSQEIAANAH
AISDLNQQSRETSAKTSHSADELQKQAESLKNQVNFFS

Sequences:

>Translated_678_residues
MFEKYKNQSVGFQLKLVILLCLLIAFGSIATLVYRNASQVLLDNTLREHQSKVEAMAKTISGQFDAYLHTAKVLESTFRN
GYLAGVYVENYDVEFNGHSIPNLTQYGESLINDTKLVDSFTRDTGAVATLFAPFGDDFIRVSTSLKKPSGERVVATTLGK
DHPGYNKLKNGQAYYAQVKLFGQRYITYYAPLTNAQGKVNGVSFIGLPVEEATQNLFESLRSVSWGDTGYTIIVDNEEEH
QGQYLLHPTNAGGDKSIVDVADYDGNKPFYQLFEQPSGLILYPFEYQGTVGEKYLVYTEVPGWNWKLLGGTFINEVTKGS
DELLKLIAIIATLIAAATIVVLTLVLNRTLTPLTTLNEYMMRLGKGEVSLHIPNNGKQTKNEISNLNTGVANMAAQLNTL
VGEIRTTSDQVQNSSSSVSQDASHNLSQSDRQQAQVEQVVTAIEEMATSAESVAQQVNSIAENVRLANEDSQKGLEVVEG
VCIDVAQLNDQLDKSASAIEQVSSDSESIQTVTKMIDDIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRTLAHRTQT
SVQDVVSIIEKLKSSTNNAVNLMTQSQSNANQVLDKAQEAGTALESIASQVESIASQAETIAATSEEQAQVSQEIAANAH
AISDLNQQSRETSAKTSHSADELQKQAESLKNQVNFFS
>Mature_678_residues
MFEKYKNQSVGFQLKLVILLCLLIAFGSIATLVYRNASQVLLDNTLREHQSKVEAMAKTISGQFDAYLHTAKVLESTFRN
GYLAGVYVENYDVEFNGHSIPNLTQYGESLINDTKLVDSFTRDTGAVATLFAPFGDDFIRVSTSLKKPSGERVVATTLGK
DHPGYNKLKNGQAYYAQVKLFGQRYITYYAPLTNAQGKVNGVSFIGLPVEEATQNLFESLRSVSWGDTGYTIIVDNEEEH
QGQYLLHPTNAGGDKSIVDVADYDGNKPFYQLFEQPSGLILYPFEYQGTVGEKYLVYTEVPGWNWKLLGGTFINEVTKGS
DELLKLIAIIATLIAAATIVVLTLVLNRTLTPLTTLNEYMMRLGKGEVSLHIPNNGKQTKNEISNLNTGVANMAAQLNTL
VGEIRTTSDQVQNSSSSVSQDASHNLSQSDRQQAQVEQVVTAIEEMATSAESVAQQVNSIAENVRLANEDSQKGLEVVEG
VCIDVAQLNDQLDKSASAIEQVSSDSESIQTVTKMIDDIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRTLAHRTQT
SVQDVVSIIEKLKSSTNNAVNLMTQSQSNANQVLDKAQEAGTALESIASQVESIASQAETIAATSEEQAQVSQEIAANAH
AISDLNQQSRETSAKTSHSADELQKQAESLKNQVNFFS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=359, Percent_Identity=31.4763231197772, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI2367378, Length=312, Percent_Identity=29.4871794871795, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=29.4117647058824, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788194, Length=357, Percent_Identity=27.1708683473389, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1789453, Length=358, Percent_Identity=25.9776536312849, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73789; Mature: 73789

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKYKNQSVGFQLKLVILLCLLIAFGSIATLVYRNASQVLLDNTLREHQSKVEAMAKTI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SGQFDAYLHTAKVLESTFRNGYLAGVYVENYDVEFNGHSIPNLTQYGESLINDTKLVDSF
CCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
TRDTGAVATLFAPFGDDFIRVSTSLKKPSGERVVATTLGKDHPGYNKLKNGQAYYAQVKL
HCCCCCHHEEECCCCCCCEEEEHHCCCCCCCEEEEEECCCCCCCHHHCCCCCHHHHHHHH
FGQRYITYYAPLTNAQGKVNGVSFIGLPVEEATQNLFESLRSVSWGDTGYTIIVDNEEEH
HHHHHEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
QGQYLLHPTNAGGDKSIVDVADYDGNKPFYQLFEQPSGLILYPFEYQGTVGEKYLVYTEV
CCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEC
PGWNWKLLGGTFINEVTKGSDELLKLIAIIATLIAAATIVVLTLVLNRTLTPLTTLNEYM
CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MRLGKGEVSLHIPNNGKQTKNEISNLNTGVANMAAQLNTLVGEIRTTSDQVQNSSSSVSQ
HHHCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHH
DASHNLSQSDRQQAQVEQVVTAIEEMATSAESVAQQVNSIAENVRLANEDSQKGLEVVEG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VCIDVAQLNDQLDKSASAIEQVSSDSESIQTVTKMIDDIAEQTNLLALNAAIEAARAGDQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCC
GRGFAVVADEVRTLAHRTQTSVQDVVSIIEKLKSSTNNAVNLMTQSQSNANQVLDKAQEA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
GTALESIASQVESIASQAETIAATSEEQAQVSQEIAANAHAISDLNQQSRETSAKTSHSA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DELQKQAESLKNQVNFFS
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFEKYKNQSVGFQLKLVILLCLLIAFGSIATLVYRNASQVLLDNTLREHQSKVEAMAKTI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SGQFDAYLHTAKVLESTFRNGYLAGVYVENYDVEFNGHSIPNLTQYGESLINDTKLVDSF
CCCHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
TRDTGAVATLFAPFGDDFIRVSTSLKKPSGERVVATTLGKDHPGYNKLKNGQAYYAQVKL
HCCCCCHHEEECCCCCCCEEEEHHCCCCCCCEEEEEECCCCCCCHHHCCCCCHHHHHHHH
FGQRYITYYAPLTNAQGKVNGVSFIGLPVEEATQNLFESLRSVSWGDTGYTIIVDNEEEH
HHHHHEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC
QGQYLLHPTNAGGDKSIVDVADYDGNKPFYQLFEQPSGLILYPFEYQGTVGEKYLVYTEV
CCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEC
PGWNWKLLGGTFINEVTKGSDELLKLIAIIATLIAAATIVVLTLVLNRTLTPLTTLNEYM
CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
MRLGKGEVSLHIPNNGKQTKNEISNLNTGVANMAAQLNTLVGEIRTTSDQVQNSSSSVSQ
HHHCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHH
DASHNLSQSDRQQAQVEQVVTAIEEMATSAESVAQQVNSIAENVRLANEDSQKGLEVVEG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VCIDVAQLNDQLDKSASAIEQVSSDSESIQTVTKMIDDIAEQTNLLALNAAIEAARAGDQ
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCC
GRGFAVVADEVRTLAHRTQTSVQDVVSIIEKLKSSTNNAVNLMTQSQSNANQVLDKAQEA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH
GTALESIASQVESIASQAETIAATSEEQAQVSQEIAANAHAISDLNQQSRETSAKTSHSA
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
DELQKQAESLKNQVNFFS
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]