| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708924
Identifier: 218708924
GI number: 218708924
Start: 952516
End: 952929
Strand: Reverse
Name: 218708924
Synonym: VS_0926
Alternate gene names: NA
Gene position: 952929-952516 (Counterclockwise)
Preceding gene: 218708925
Following gene: 218708923
Centisome position: 28.88
GC content: 44.69
Gene sequence:
>414_bases ATGCACAAGTTTTTCACACCTCTGCCGATACTATATTTAAGGATAGGTAAGGAGAGCGATATGACACCAGTAGGAACGAG TAATACTCAGCTGTATTCACCTGCGAAAATGAACGCACAGAATAAAAGCACCGAGGCTGAAAAGCCTGCTCCACTCAAGG TGGAACAAAATACCGTTAAGCTTTCCGATGAAGGAAAAGCGCTATTATCTGCTCTTAAACAAATCGATAAAGAATCCAAA AAATTCGAAGCGGAAAATGCAACCGTTACCGATAAAGTTGAATCGTTCGCTCACGGCGCCTTAGGCATGGACCACCCAGA CAAGGTTGAAGAAGAGGATGATGGCTCATATTCAGCGGGGCAATTCTTGTCCGCGGCACTTACCGTAGGTGGCATCCTTA TCGCTTTAGTCTAA
Upstream 100 bases:
>100_bases AAATTCCTTATCGGCACAAGATTTGCTTAATAACTAGACGGTTTGACTAAGCAGACGAAAAAACAATGTGCGAATAAAAA AACATCACCACGGTGATTAA
Downstream 100 bases:
>100_bases CTTTTTGCTTTAACCTAATTTCGCTTTAGCCTAACTTTACAGCTCTGCTTCTCTATTCTTTCATTACCTACCTTTTATTG AATAGAAGCAATTTGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MHKFFTPLPILYLRIGKESDMTPVGTSNTQLYSPAKMNAQNKSTEAEKPAPLKVEQNTVKLSDEGKALLSALKQIDKESK KFEAENATVTDKVESFAHGALGMDHPDKVEEEDDGSYSAGQFLSAALTVGGILIALV
Sequences:
>Translated_137_residues MHKFFTPLPILYLRIGKESDMTPVGTSNTQLYSPAKMNAQNKSTEAEKPAPLKVEQNTVKLSDEGKALLSALKQIDKESK KFEAENATVTDKVESFAHGALGMDHPDKVEEEDDGSYSAGQFLSAALTVGGILIALV >Mature_137_residues MHKFFTPLPILYLRIGKESDMTPVGTSNTQLYSPAKMNAQNKSTEAEKPAPLKVEQNTVKLSDEGKALLSALKQIDKESK KFEAENATVTDKVESFAHGALGMDHPDKVEEEDDGSYSAGQFLSAALTVGGILIALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14811; Mature: 14811
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFFTPLPILYLRIGKESDMTPVGTSNTQLYSPAKMNAQNKSTEAEKPAPLKVEQNTVK CCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCEEE LSDEGKALLSALKQIDKESKKFEAENATVTDKVESFAHGALGMDHPDKVEEEDDGSYSAG ECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH QFLSAALTVGGILIALV HHHHHHHHHHHHHHHCC >Mature Secondary Structure MHKFFTPLPILYLRIGKESDMTPVGTSNTQLYSPAKMNAQNKSTEAEKPAPLKVEQNTVK CCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCEEE LSDEGKALLSALKQIDKESKKFEAENATVTDKVESFAHGALGMDHPDKVEEEDDGSYSAG ECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH QFLSAALTVGGILIALV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA