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The map label for this gene is ycgN [C]

Identifier: 218708921

GI number: 218708921

Start: 948106

End: 948543

Strand: Direct

Name: ycgN [C]

Synonym: VS_0923

Alternate gene names: 218708921

Gene position: 948106-948543 (Clockwise)

Preceding gene: 218708920

Following gene: 218708931

Centisome position: 28.74

GC content: 43.15

Gene sequence:

>438_bases
ATGACGATTCCATTTTGGCAAGAAAAGACACTAGAGCAAATGACCGAGAACGAGTGGGAATCACTGTGTGACGGTTGTGG
TAAGTGTTGCCTACATAAACTAATGGATGAAGATAGCGATGAAGTTTACTACACTAATGTGGCGTGTAGCTGGTTAAACG
ACAAAACATGTTCGTGTAAAGATTACCCGAACCGATTCACTTCAGGTGAAGAGTGTTTGAAGCTGACTCGTGACAAAATC
GATGAGTTTCACTGGCTACCAGATACTTGTGCTTACCGTCTTCTATCTGAATCTAAGCCGATTCCTGAGTGGCACCCATT
GATTACGGGTTCTAAATCAGAGATGCATGCTGCAGGTGAAAGTGTTCGTAACAAAGTGGTATACGAAATCGATGTTGTCG
ATTGGGAAGACCACATCTTGAATCACCCAAATCGCTAG

Upstream 100 bases:

>100_bases
TCTACCGCATAGCGAAAGAGCGTTAGCTGATTTTATTCTTGAACTTATATTCGGCTAGCGGTATAACACGCACCCCAGTA
AAAGAGTAAGAAGTAATCCT

Downstream 100 bases:

>100_bases
TTATTCTAAAAACAGCCGCTCTTGAGCGGCTGTTTTGCTATTTGGCGTCGCCTAAATTTACTTAATTACTTAACTTAAAG
GCTTAAAACAAAAAACGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MTIPFWQEKTLEQMTENEWESLCDGCGKCCLHKLMDEDSDEVYYTNVACSWLNDKTCSCKDYPNRFTSGEECLKLTRDKI
DEFHWLPDTCAYRLLSESKPIPEWHPLITGSKSEMHAAGESVRNKVVYEIDVVDWEDHILNHPNR

Sequences:

>Translated_145_residues
MTIPFWQEKTLEQMTENEWESLCDGCGKCCLHKLMDEDSDEVYYTNVACSWLNDKTCSCKDYPNRFTSGEECLKLTRDKI
DEFHWLPDTCAYRLLSESKPIPEWHPLITGSKSEMHAAGESVRNKVVYEIDVVDWEDHILNHPNR
>Mature_144_residues
TIPFWQEKTLEQMTENEWESLCDGCGKCCLHKLMDEDSDEVYYTNVACSWLNDKTCSCKDYPNRFTSGEECLKLTRDKID
EFHWLPDTCAYRLLSESKPIPEWHPLITGSKSEMHAAGESVRNKVVYEIDVVDWEDHILNHPNR

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family

Homologues:

Organism=Escherichia coli, GI145693117, Length=142, Percent_Identity=61.9718309859155, Blast_Score=199, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y923_VIBSL (B7VLA3)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416542.1
- GeneID:   7160519
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0923
- HOGENOM:   HBG490440
- OMA:   TCQCSDY
- ProtClustDB:   PRK05170
- HAMAP:   MF_00676
- InterPro:   IPR008228
- InterPro:   IPR005358
- PIRSF:   PIRSF006173

Pfam domain/function: PF03692 UPF0153

EC number: NA

Molecular weight: Translated: 16994; Mature: 16863

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPFWQEKTLEQMTENEWESLCDGCGKCCLHKLMDEDSDEVYYTNVACSWLNDKTCSCK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC
DYPNRFTSGEECLKLTRDKIDEFHWLPDTCAYRLLSESKPIPEWHPLITGSKSEMHAAGE
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
SVRNKVVYEIDVVDWEDHILNHPNR
HHHCCEEEEEEEECCHHHHCCCCCC
>Mature Secondary Structure 
TIPFWQEKTLEQMTENEWESLCDGCGKCCLHKLMDEDSDEVYYTNVACSWLNDKTCSCK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCC
DYPNRFTSGEECLKLTRDKIDEFHWLPDTCAYRLLSESKPIPEWHPLITGSKSEMHAAGE
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
SVRNKVVYEIDVVDWEDHILNHPNR
HHHCCEEEEEEEECCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA