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The map label for this gene is dedD [H]

Identifier: 218708905

GI number: 218708905

Start: 935114

End: 935689

Strand: Direct

Name: dedD [H]

Synonym: VS_0906

Alternate gene names: 218708905

Gene position: 935114-935689 (Clockwise)

Preceding gene: 218708904

Following gene: 218708906

Centisome position: 28.34

GC content: 41.32

Gene sequence:

>576_bases
ATGGCAAGTAAATTCCAAAGCCGATTAGTCGGCACCATCATTTTAGTGGCCATTGGCGTGATTGTATTGCCCGATGTGCT
GGATGGTAAGAAGCTCCACTATAAAGAAGAGTTTGCAAGCATTCCGATTAAGCCTGAGCTTGATAGTAATGTTGAAGTGT
TTGAAGTGCTCGATCCTGTTGAAGATCAGATTGCACTGCCGGACTCTCCGGTTGAGCAAGTGGTTGAAAGTGGTCGTACT
GATAATTCAAACACGCAAACTGCGTCGGCTTCCAGTAACAAAGAAGCGGATAAAGTGGCAGTCGTGGTTAAGCCGGTACC
TGAAAAAAATGAATACCAAGACAGTGCTTGGATTATTCAATTGATGGCTTTGAAGAATGCTGACAACGCAAAAAACGTTG
TTAAGGATTTACAGAAGCGTGGTTATCAGGCTCATACCAAGCAAGAAAAAACATTTACGCGAGTAATTATTGGCCCGGAT
GTTTCTAAATCCAAACTTGAGCGACAAATTAAGGAATTAGAAAAAATTACGGGTTCAAAAGGCCAATTGCTCAAATTTAA
ACCGTTAAATCCATAA

Upstream 100 bases:

>100_bases
GGCTTTAGCTTCTGTTATAGATGACGATGTTGTGTTGGTTGTCGGTTCTTTTCATACCGTGGGTGAAGTGTTGGAGCATT
GGCAGAAAAAAGGAAACTAA

Downstream 100 bases:

>100_bases
GAAAACGTTTGCGTCAGCATTTTTTCTGTTAAAATGCGCGCCAACTTAAGATGAAGAATTCATGAATTGGTTAGATTTTG
TCATTTTAGGCGTGATCGGC

Product: DedD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MASKFQSRLVGTIILVAIGVIVLPDVLDGKKLHYKEEFASIPIKPELDSNVEVFEVLDPVEDQIALPDSPVEQVVESGRT
DNSNTQTASASSNKEADKVAVVVKPVPEKNEYQDSAWIIQLMALKNADNAKNVVKDLQKRGYQAHTKQEKTFTRVIIGPD
VSKSKLERQIKELEKITGSKGQLLKFKPLNP

Sequences:

>Translated_191_residues
MASKFQSRLVGTIILVAIGVIVLPDVLDGKKLHYKEEFASIPIKPELDSNVEVFEVLDPVEDQIALPDSPVEQVVESGRT
DNSNTQTASASSNKEADKVAVVVKPVPEKNEYQDSAWIIQLMALKNADNAKNVVKDLQKRGYQAHTKQEKTFTRVIIGPD
VSKSKLERQIKELEKITGSKGQLLKFKPLNP
>Mature_190_residues
ASKFQSRLVGTIILVAIGVIVLPDVLDGKKLHYKEEFASIPIKPELDSNVEVFEVLDPVEDQIALPDSPVEQVVESGRTD
NSNTQTASASSNKEADKVAVVVKPVPEKNEYQDSAWIIQLMALKNADNAKNVVKDLQKRGYQAHTKQEKTFTRVIIGPDV
SKSKLERQIKELEKITGSKGQLLKFKPLNP

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=222, Percent_Identity=34.6846846846847, Blast_Score=117, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 21162; Mature: 21030

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKFQSRLVGTIILVAIGVIVLPDVLDGKKLHYKEEFASIPIKPELDSNVEVFEVLDPV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCH
EDQIALPDSPVEQVVESGRTDNSNTQTASASSNKEADKVAVVVKPVPEKNEYQDSAWIIQ
HHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
LMALKNADNAKNVVKDLQKRGYQAHTKQEKTFTRVIIGPDVSKSKLERQIKELEKITGSK
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCC
GQLLKFKPLNP
CCEEEECCCCC
>Mature Secondary Structure 
ASKFQSRLVGTIILVAIGVIVLPDVLDGKKLHYKEEFASIPIKPELDSNVEVFEVLDPV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCH
EDQIALPDSPVEQVVESGRTDNSNTQTASASSNKEADKVAVVVKPVPEKNEYQDSAWIIQ
HHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH
LMALKNADNAKNVVKDLQKRGYQAHTKQEKTFTRVIIGPDVSKSKLERQIKELEKITGSK
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCC
GQLLKFKPLNP
CCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]