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The map label for this gene is ycjP [C]

Identifier: 218708877

GI number: 218708877

Start: 901482

End: 902339

Strand: Direct

Name: ycjP [C]

Synonym: VS_0877

Alternate gene names: 218708877

Gene position: 901482-902339 (Clockwise)

Preceding gene: 218708876

Following gene: 218708878

Centisome position: 27.32

GC content: 45.1

Gene sequence:

>858_bases
ATGATGAATAACATCAATTTTGCTCGAATCTTTATTTATTCAGCACTGCTTTTCTTCTGCTTAGTGTATCTAATGCCATT
GTTTGTGATGGCGCTGACGTCATTCAAAACCTTACCTGATATCAAGGCGGGTAACCTGATGAGCCTCCCGAAAGAGTGGG
TGTTCGATGCTTGGTATAAAGCGTGGGATACCGCCTGTACGGGCGTGAAATGTGAAGGTATCAAAGGGTACTTCTGGAAC
TCGTTCCAAATGGTGATACCTGCGGTTGCGATCTCAACATTGCTCGGTGCATTCAATGGCTACGTGGTAACCAAGTGGCA
GTTCAGAGGTTCAAATCTGTTCTTTAGTTTGCTGTTGTTTGGCTGTTTTATTCCGTTCCAAGTTGTGCTGCTACCAATGG
CAACCATGCTTGGCAAGATGGGTTTAGCAAACACAACCATCGGTTTGGTGATTGTGCACGTTATCTATGGCATGGCATTT
ACGACTCTGTTTTTCCGTAACTTCTACATCTCGATTCCTGATGAGTTGGTCAAAGCGGCAAAACTGGATGGCGCAGGCTT
CTTTACCATTTTCTTTAAGATCTTATTACCGATCTCTACACCTATCATCATGGTGACGGTGATCTGGCAGTTCACTGCAA
TCTGGAATGATTTCTTGTTCGGGGTGGTGTACTCAGGCTCAGAAACTCAGCCGATCACTGTGGCATTAAACAACCTAGTC
AACACCAGCACAGGCGTTAAAGAATATAACGTCGATATGGCTGCCGCGATCATCGCCGCCTTGCCAACGCTGTTGGTGTA
TGTATTCGCAGGAAAATATTTTGTTCGTGGCCTAACGGCAGGATCAGTAAAAGGATAA

Upstream 100 bases:

>100_bases
GACAAATCGGCCTTGGTGCTGCCAGTGCCATGATGATGCTTGCCGGTATTTTAGCGATTCTCGTGCCTTATCTTTACTCT
GAACTTAGGGAGAAAAAGTC

Downstream 100 bases:

>100_bases
TTACCCATGGCAACATTAGATTTAAAACAGATCCGTAAAACCTATCGCAACGCGGACAACGAAACGTTAAAGGGCATCGA
CATCAGTATCGATTCGGGGG

Product: ABC transporter transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MMNNINFARIFIYSALLFFCLVYLMPLFVMALTSFKTLPDIKAGNLMSLPKEWVFDAWYKAWDTACTGVKCEGIKGYFWN
SFQMVIPAVAISTLLGAFNGYVVTKWQFRGSNLFFSLLLFGCFIPFQVVLLPMATMLGKMGLANTTIGLVIVHVIYGMAF
TTLFFRNFYISIPDELVKAAKLDGAGFFTIFFKILLPISTPIIMVTVIWQFTAIWNDFLFGVVYSGSETQPITVALNNLV
NTSTGVKEYNVDMAAAIIAALPTLLVYVFAGKYFVRGLTAGSVKG

Sequences:

>Translated_285_residues
MMNNINFARIFIYSALLFFCLVYLMPLFVMALTSFKTLPDIKAGNLMSLPKEWVFDAWYKAWDTACTGVKCEGIKGYFWN
SFQMVIPAVAISTLLGAFNGYVVTKWQFRGSNLFFSLLLFGCFIPFQVVLLPMATMLGKMGLANTTIGLVIVHVIYGMAF
TTLFFRNFYISIPDELVKAAKLDGAGFFTIFFKILLPISTPIIMVTVIWQFTAIWNDFLFGVVYSGSETQPITVALNNLV
NTSTGVKEYNVDMAAAIIAALPTLLVYVFAGKYFVRGLTAGSVKG
>Mature_285_residues
MMNNINFARIFIYSALLFFCLVYLMPLFVMALTSFKTLPDIKAGNLMSLPKEWVFDAWYKAWDTACTGVKCEGIKGYFWN
SFQMVIPAVAISTLLGAFNGYVVTKWQFRGSNLFFSLLLFGCFIPFQVVLLPMATMLGKMGLANTTIGLVIVHVIYGMAF
TTLFFRNFYISIPDELVKAAKLDGAGFFTIFFKILLPISTPIIMVTVIWQFTAIWNDFLFGVVYSGSETQPITVALNNLV
NTSTGVKEYNVDMAAAIIAALPTLLVYVFAGKYFVRGLTAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=288, Percent_Identity=25.6944444444444, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789860, Length=283, Percent_Identity=24.3816254416961, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1790464, Length=308, Percent_Identity=27.9220779220779, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31717; Mature: 31717

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNINFARIFIYSALLFFCLVYLMPLFVMALTSFKTLPDIKAGNLMSLPKEWVFDAWYK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AWDTACTGVKCEGIKGYFWNSFQMVIPAVAISTLLGAFNGYVVTKWQFRGSNLFFSLLLF
HHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHH
GCFIPFQVVLLPMATMLGKMGLANTTIGLVIVHVIYGMAFTTLFFRNFYISIPDELVKAA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
KLDGAGFFTIFFKILLPISTPIIMVTVIWQFTAIWNDFLFGVVYSGSETQPITVALNNLV
HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHEEHHHHH
NTSTGVKEYNVDMAAAIIAALPTLLVYVFAGKYFVRGLTAGSVKG
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMNNINFARIFIYSALLFFCLVYLMPLFVMALTSFKTLPDIKAGNLMSLPKEWVFDAWYK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
AWDTACTGVKCEGIKGYFWNSFQMVIPAVAISTLLGAFNGYVVTKWQFRGSNLFFSLLLF
HHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHH
GCFIPFQVVLLPMATMLGKMGLANTTIGLVIVHVIYGMAFTTLFFRNFYISIPDELVKAA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
KLDGAGFFTIFFKILLPISTPIIMVTVIWQFTAIWNDFLFGVVYSGSETQPITVALNNLV
HCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHEEHHHHH
NTSTGVKEYNVDMAAAIIAALPTLLVYVFAGKYFVRGLTAGSVKG
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]