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The map label for this gene is soj [H]

Identifier: 218708845

GI number: 218708845

Start: 868086

End: 868868

Strand: Direct

Name: soj [H]

Synonym: VS_0845

Alternate gene names: 218708845

Gene position: 868086-868868 (Clockwise)

Preceding gene: 218708844

Following gene: 218708846

Centisome position: 26.31

GC content: 45.47

Gene sequence:

>783_bases
ATGATTGTTTGGAGTGTTGCAAACCAAAAAGGTGGCGTTGGAAAAACGACGACGACAGTGACCCTAGCTGGCTTACTTGC
CTTAAAGGGTCATCGTGTGTTGTTGGTTGATACTGACCCACATGCATCACTAACCACCTATTTGGGTTACGACTCAGATA
CGGTGGAATCGAGCCTGTTTGATCTGTTCCAGCTGCGTGAGTTTTCTACGCAAGCTGTGAGAGCGTTGACTATACAGACC
GAAATTGAAGGTATCGATATTATTCCCGCACACATGTCATTGGCGACATTAGACCGTGTAATGGGAAATCGAAGTGGTAT
GGGGTTGATCTTAAAGCGTGCTTTAGCCGCTTTGAAAGATGACTATGACTACGTGCTTATCGATTGTCCGCCTATTCTTG
GTGTGATGATGGTGAATGCGTTGGCTGCCAGTGATCGTATCTTGATTCCGGTACAGACTGAATTTTTGGCGATGAAGGGT
TTAGAGCGCATGATTCGCACTCTAACCATTATGCAGAAGTCTCGCAAAACACCGTTTAAGGTGACGATTGTCCCGACGAT
GTACGACAAGCGAACGAAAGCATCATTGCAAACATTGACTCAGCTTAAAGATGACTATCCAAACCAAGTTTGGACCTCTG
CTGTGCCGATTGATACCAAGTTTCGCGATGCCAGTCTAAAACGTTTGCCAGCATCTCATTTCGCATCGGGTAGCCGTGGT
GTATTTGCTTATAAACAGCTGCTTATTTATCTCGAGAGGTTAGCGATAAATGAGCGCGAATAA

Upstream 100 bases:

>100_bases
CAAGCTGTAGCAAAAGCTGGCATTTCTACTGAAGACCTACCTCTAGACCGCGTTGCGGAACGGATTTTGGTCGAAGTTGG
GTTAGCTTAGGTAAATCGAC

Downstream 100 bases:

>100_bases
CGAATCGACATTGACGCAACCAAGTTTATCGAGTGAACAAGCAATCGATGATTACTTTACCGCGCTGTTAGGCGATGAAA
ACTTTGAATCTGATGCTTTT

Product: SOJ-like and chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIVWSVANQKGGVGKTTTTVTLAGLLALKGHRVLLVDTDPHASLTTYLGYDSDTVESSLFDLFQLREFSTQAVRALTIQT
EIEGIDIIPAHMSLATLDRVMGNRSGMGLILKRALAALKDDYDYVLIDCPPILGVMMVNALAASDRILIPVQTEFLAMKG
LERMIRTLTIMQKSRKTPFKVTIVPTMYDKRTKASLQTLTQLKDDYPNQVWTSAVPIDTKFRDASLKRLPASHFASGSRG
VFAYKQLLIYLERLAINERE

Sequences:

>Translated_260_residues
MIVWSVANQKGGVGKTTTTVTLAGLLALKGHRVLLVDTDPHASLTTYLGYDSDTVESSLFDLFQLREFSTQAVRALTIQT
EIEGIDIIPAHMSLATLDRVMGNRSGMGLILKRALAALKDDYDYVLIDCPPILGVMMVNALAASDRILIPVQTEFLAMKG
LERMIRTLTIMQKSRKTPFKVTIVPTMYDKRTKASLQTLTQLKDDYPNQVWTSAVPIDTKFRDASLKRLPASHFASGSRG
VFAYKQLLIYLERLAINERE
>Mature_260_residues
MIVWSVANQKGGVGKTTTTVTLAGLLALKGHRVLLVDTDPHASLTTYLGYDSDTVESSLFDLFQLREFSTQAVRALTIQT
EIEGIDIIPAHMSLATLDRVMGNRSGMGLILKRALAALKDDYDYVLIDCPPILGVMMVNALAASDRILIPVQTEFLAMKG
LERMIRTLTIMQKSRKTPFKVTIVPTMYDKRTKASLQTLTQLKDDYPNQVWTSAVPIDTKFRDASLKRLPASHFASGSRG
VFAYKQLLIYLERLAINERE

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28938; Mature: 28938

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVWSVANQKGGVGKTTTTVTLAGLLALKGHRVLLVDTDPHASLTTYLGYDSDTVESSLF
CEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCHHHHHHHH
DLFQLREFSTQAVRALTIQTEIEGIDIIPAHMSLATLDRVMGNRSGMGLILKRALAALKD
HHHHHHHHHHHHHHEEEEEEECCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DYDYVLIDCPPILGVMMVNALAASDRILIPVQTEFLAMKGLERMIRTLTIMQKSRKTPFK
CCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VTIVPTMYDKRTKASLQTLTQLKDDYPNQVWTSAVPIDTKFRDASLKRLPASHFASGSRG
EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCC
VFAYKQLLIYLERLAINERE
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIVWSVANQKGGVGKTTTTVTLAGLLALKGHRVLLVDTDPHASLTTYLGYDSDTVESSLF
CEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCCHHHHHHHH
DLFQLREFSTQAVRALTIQTEIEGIDIIPAHMSLATLDRVMGNRSGMGLILKRALAALKD
HHHHHHHHHHHHHHEEEEEEECCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
DYDYVLIDCPPILGVMMVNALAASDRILIPVQTEFLAMKGLERMIRTLTIMQKSRKTPFK
CCCEEEEECCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VTIVPTMYDKRTKASLQTLTQLKDDYPNQVWTSAVPIDTKFRDASLKRLPASHFASGSRG
EEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCC
VFAYKQLLIYLERLAINERE
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]