| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is cheB1 [H]
Identifier: 218708844
GI number: 218708844
Start: 866951
End: 868075
Strand: Direct
Name: cheB1 [H]
Synonym: VS_0844
Alternate gene names: 218708844
Gene position: 866951-868075 (Clockwise)
Preceding gene: 218708843
Following gene: 218708845
Centisome position: 26.28
GC content: 48.0
Gene sequence:
>1125_bases ATGGCGATTAAAGTATTAGTCGTTGATGATTCGAGCTTCTTTCGTCGTAGAGTAAGCGAAATCATCAACTCGGAGGCTCG CCTAGAAGTCATCGATGTAGCAGTAAACGGTAAAGAAGCGGTTGAGAAAGCGAAAAAGCTAAGACCTGACGTAATTACCA TGGACATCGAGATGCCTGTCATGGACGGTATTACTGCCGTTCGTGAAATTATGGCTGCGTCTCCGACGCCTATTTTGATG TTTTCATCGTTAACGCATGATGGTGCAAGAGCAACGTTAGATGCGTTAGATGCGGGTGCTCTAGATTTCTTACCTAAGAA ATTTGAAGACATCGCTCGTAACCGTGACGACGCTGTCGCATTGCTTCAACAGCGCGTGATTCAGATTGCTGCAAAACGCG CGTTTATGCGACGTTCTCCTGTTACGCCAAGAGCTACCGCAACAGCTACGGCGTCAACATCAGCGCCATTGCGCCAATCT ATTTCAGCAACAGCCCCTGCTGCTAAACCAGCGGTTGCTTCAACCGCGAAATTCAGAGCCTCGGGTAAAAAGTATCAATT AACTGCTATTGGTACTTCTACTGGTGGGCCAGTTGCACTACAGAAAATTTTGACACGCATCCCTGCCAGCTACCCACATC CGATTGTGTTAGTGCAGCATATGCCAGCAACGTTCACCGCTGCTTTTGCTAGCCGATTGAATACCTTGTGTAAGATTGAA GTTCGTGAAGCTCAAGACGGAGACCTGTTGAAACCTGGGGTGGCTTATCTTGCTCCAGGCGGAAAGCAAATGATGATTGA TGGTCGCCCGGGTTCGGCGCGTCTGAAGATTATCGATGGTGGTGACCGAATGAACTACAAGCCTTGTGTGGATGTCACTT TTGGTTCTGCAGCTAAGATCTACGGCGATAAAGTGTTGTCTATGATACTGACCGGTATGGGTGCTGATGGTCGAGAAGGT TCTCGCATGTTAAAAACAGCGGGTTCGACCATTTGGGCGCAAGACGAAGATAGTTGTGTTGTATATGGTATGCCTCAAGC TGTAGCAAAAGCTGGCATTTCTACTGAAGACCTACCTCTAGACCGCGTTGCGGAACGGATTTTGGTCGAAGTTGGGTTAG CTTAG
Upstream 100 bases:
>100_bases GCGACAATTACAAGTGACGGTCACATAGCATTGATTTTAGATGTGCCGGACTTGTTGAAGCAGTACGCAGCTGCATCAAG AATTTAACTTAAGGATAAAT
Downstream 100 bases:
>100_bases GTAAATCGACATGATTGTTTGGAGTGTTGCAAACCAAAAAGGTGGCGTTGGAAAAACGACGACGACAGTGACCCTAGCTG GCTTACTTGCCTTAAAGGGT
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MAIKVLVVDDSSFFRRRVSEIINSEARLEVIDVAVNGKEAVEKAKKLRPDVITMDIEMPVMDGITAVREIMAASPTPILM FSSLTHDGARATLDALDAGALDFLPKKFEDIARNRDDAVALLQQRVIQIAAKRAFMRRSPVTPRATATATASTSAPLRQS ISATAPAAKPAVASTAKFRASGKKYQLTAIGTSTGGPVALQKILTRIPASYPHPIVLVQHMPATFTAAFASRLNTLCKIE VREAQDGDLLKPGVAYLAPGGKQMMIDGRPGSARLKIIDGGDRMNYKPCVDVTFGSAAKIYGDKVLSMILTGMGADGREG SRMLKTAGSTIWAQDEDSCVVYGMPQAVAKAGISTEDLPLDRVAERILVEVGLA
Sequences:
>Translated_374_residues MAIKVLVVDDSSFFRRRVSEIINSEARLEVIDVAVNGKEAVEKAKKLRPDVITMDIEMPVMDGITAVREIMAASPTPILM FSSLTHDGARATLDALDAGALDFLPKKFEDIARNRDDAVALLQQRVIQIAAKRAFMRRSPVTPRATATATASTSAPLRQS ISATAPAAKPAVASTAKFRASGKKYQLTAIGTSTGGPVALQKILTRIPASYPHPIVLVQHMPATFTAAFASRLNTLCKIE VREAQDGDLLKPGVAYLAPGGKQMMIDGRPGSARLKIIDGGDRMNYKPCVDVTFGSAAKIYGDKVLSMILTGMGADGREG SRMLKTAGSTIWAQDEDSCVVYGMPQAVAKAGISTEDLPLDRVAERILVEVGLA >Mature_373_residues AIKVLVVDDSSFFRRRVSEIINSEARLEVIDVAVNGKEAVEKAKKLRPDVITMDIEMPVMDGITAVREIMAASPTPILMF SSLTHDGARATLDALDAGALDFLPKKFEDIARNRDDAVALLQQRVIQIAAKRAFMRRSPVTPRATATATASTSAPLRQSI SATAPAAKPAVASTAKFRASGKKYQLTAIGTSTGGPVALQKILTRIPASYPHPIVLVQHMPATFTAAFASRLNTLCKIEV REAQDGDLLKPGVAYLAPGGKQMMIDGRPGSARLKIIDGGDRMNYKPCVDVTFGSAAKIYGDKVLSMILTGMGADGREGS RMLKTAGSTIWAQDEDSCVVYGMPQAVAKAGISTEDLPLDRVAERILVEVGLA
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=369, Percent_Identity=36.5853658536585, Blast_Score=230, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 39924; Mature: 39793
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLVVDDSSFFRRRVSEIINSEARLEVIDVAVNGKEAVEKAKKLRPDVITMDIEMPV CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCH MDGITAVREIMAASPTPILMFSSLTHDGARATLDALDAGALDFLPKKFEDIARNRDDAVA HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH LLQQRVIQIAAKRAFMRRSPVTPRATATATASTSAPLRQSISATAPAAKPAVASTAKFRA HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHC SGKKYQLTAIGTSTGGPVALQKILTRIPASYPHPIVLVQHMPATFTAAFASRLNTLCKIE CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEE VREAQDGDLLKPGVAYLAPGGKQMMIDGRPGSARLKIIDGGDRMNYKPCVDVTFGSAAKI EECCCCCCCCCCCHHEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCHHHH YGDKVLSMILTGMGADGREGSRMLKTAGSTIWAQDEDSCVVYGMPQAVAKAGISTEDLPL HHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCEEEEECHHHHHHCCCCCCCCCH DRVAERILVEVGLA HHHHHHHHHHHCCC >Mature Secondary Structure AIKVLVVDDSSFFRRRVSEIINSEARLEVIDVAVNGKEAVEKAKKLRPDVITMDIEMPV EEEEEEECCCHHHHHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCH MDGITAVREIMAASPTPILMFSSLTHDGARATLDALDAGALDFLPKKFEDIARNRDDAVA HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH LLQQRVIQIAAKRAFMRRSPVTPRATATATASTSAPLRQSISATAPAAKPAVASTAKFRA HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCCCHHHHHHHHC SGKKYQLTAIGTSTGGPVALQKILTRIPASYPHPIVLVQHMPATFTAAFASRLNTLCKIE CCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEE VREAQDGDLLKPGVAYLAPGGKQMMIDGRPGSARLKIIDGGDRMNYKPCVDVTFGSAAKI EECCCCCCCCCCCHHEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCHHHH YGDKVLSMILTGMGADGREGSRMLKTAGSTIWAQDEDSCVVYGMPQAVAKAGISTEDLPL HHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEECCCCCEEEEECHHHHHHCCCCCCCCCH DRVAERILVEVGLA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA