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The map label for this gene is ytfL [C]

Identifier: 218708681

GI number: 218708681

Start: 685877

End: 687166

Strand: Direct

Name: ytfL [C]

Synonym: VS_0660

Alternate gene names: 218708681

Gene position: 685877-687166 (Clockwise)

Preceding gene: 218708680

Following gene: 218708682

Centisome position: 20.79

GC content: 45.97

Gene sequence:

>1290_bases
ATGAAGATTCTGCTTTTAGTAGGGTTAATTGTTTTAAATGGTCTGTTTGCCATGTCAGAGATTGCACTGGTAGCAGCAAA
GAATAGTCGGCTGAAACGCTTAGCCGAAAAACATCGCTCCGCTCAGGTTGCTCTTGAGCTCAAAGAAAATCCAACCCGCT
TCCTTTCAACCATTCAAATCGGTATTACGGTAATCGGCCTACTCAGCGGTATTGTGGGTGAGGCGACGCTTTCTGCTCCA
CTGGCCGTTCAACTTGAACTGTGGGGACTCGATCCAACACAAGCGAATATCCTGTCTACCACGGTAGTCGTTGTGGGTAT
TACTTACTTCGCGATTGTTGTAGGTGAGCTAGTGCCAAAACGTTTTGCTCAATCTCAAGCTGAAAACATTGCTGTGCTAG
TCGCGCTGCCTATCTTCTGGTTATCTAAAATTGCGACGCCGTTTGTGTTTGCGTTGTCTGCTTCTACGGAAGGTATTCTC
AAGTTAATGGGACGTGGTGGCGAAGAAGACAGTGTGACGGAAGATGATATTCATGCACTCGTGAAAGAAGGCTCGGAATC
TGGTGTGATTGAACGTGGCGAGCAAGAGATGATTCGCAATATCTTACAGCTTGATGACCGTTTGGTGAGCTCGTTGATGA
CGCCACGTCGAGACGTCGACTTTCTGGATATTAGCCAACCGGTTGAGCAGATATTTAAAAAGCTGCGCAGTTCAAAGCAT
AGTGTGTTTCCATTGTGCCAAGACCACCTAAATAAAGTGGTCGGTACGGTGTCAGCCAAAGCCTTATTGAATCAGGCGGG
CAATTTAAACATTCAAGTGATCATGGGGCTATCTCGCTCTCCGATCTATGTTCCTGAATCGATGAAGGCTTTACGTCTAC
TTGGCTATTTTAAAGAGTCGGGTACAGAGATGGCATTCATTGTTGATGAATATGGCGATGTTCAAGGCCTTGTGACTCAT
TACGATATCCTAGAGGCGATTGCTGGTGAGTTATCGAACAACCCTAAAGATCTTTGGACAGAGCAAGTGGAAGATGGATT
GCTGGTGGATGGGTTGATTCCTATCAGTGAACTGAAAAACCGCTTAGAGCTGTCGGATTTTGAGGGTGAAAGCGAGAGCT
TCCAAACGTTGAATGGCCTAGTGACTTGGTTAATAGGGCGCTTACCTGATGCAGGTGAAGTTGTTCAATACCAGCAGTGG
CAGTTTGAAGTTATCTCTGTTGAGAACAATCGCATTGTGAGTATCAAAGCGACGCAAATAGCCGATGACATAGAAGGCGC
CAATAGCTAG

Upstream 100 bases:

>100_bases
TTCTATATCCCAAACTTTTTATATTCAAAATAAAGGCACTCAGCTTATACTCCGGATTACGGCTAATTGTTGGCCGGTAA
ATTTAGGAAATCCAAGCCAC

Downstream 100 bases:

>100_bases
CGATCCGCCTAATCAGTAAGCGGCGATTGTTCATTGCCTCTTATCTCTTTATTGTTCATTATCACGAAGATTAGGTATGC
TTCACCGCATACCTATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKILLLVGLIVLNGLFAMSEIALVAAKNSRLKRLAEKHRSAQVALELKENPTRFLSTIQIGITVIGLLSGIVGEATLSAP
LAVQLELWGLDPTQANILSTTVVVVGITYFAIVVGELVPKRFAQSQAENIAVLVALPIFWLSKIATPFVFALSASTEGIL
KLMGRGGEEDSVTEDDIHALVKEGSESGVIERGEQEMIRNILQLDDRLVSSLMTPRRDVDFLDISQPVEQIFKKLRSSKH
SVFPLCQDHLNKVVGTVSAKALLNQAGNLNIQVIMGLSRSPIYVPESMKALRLLGYFKESGTEMAFIVDEYGDVQGLVTH
YDILEAIAGELSNNPKDLWTEQVEDGLLVDGLIPISELKNRLELSDFEGESESFQTLNGLVTWLIGRLPDAGEVVQYQQW
QFEVISVENNRIVSIKATQIADDIEGANS

Sequences:

>Translated_429_residues
MKILLLVGLIVLNGLFAMSEIALVAAKNSRLKRLAEKHRSAQVALELKENPTRFLSTIQIGITVIGLLSGIVGEATLSAP
LAVQLELWGLDPTQANILSTTVVVVGITYFAIVVGELVPKRFAQSQAENIAVLVALPIFWLSKIATPFVFALSASTEGIL
KLMGRGGEEDSVTEDDIHALVKEGSESGVIERGEQEMIRNILQLDDRLVSSLMTPRRDVDFLDISQPVEQIFKKLRSSKH
SVFPLCQDHLNKVVGTVSAKALLNQAGNLNIQVIMGLSRSPIYVPESMKALRLLGYFKESGTEMAFIVDEYGDVQGLVTH
YDILEAIAGELSNNPKDLWTEQVEDGLLVDGLIPISELKNRLELSDFEGESESFQTLNGLVTWLIGRLPDAGEVVQYQQW
QFEVISVENNRIVSIKATQIADDIEGANS
>Mature_429_residues
MKILLLVGLIVLNGLFAMSEIALVAAKNSRLKRLAEKHRSAQVALELKENPTRFLSTIQIGITVIGLLSGIVGEATLSAP
LAVQLELWGLDPTQANILSTTVVVVGITYFAIVVGELVPKRFAQSQAENIAVLVALPIFWLSKIATPFVFALSASTEGIL
KLMGRGGEEDSVTEDDIHALVKEGSESGVIERGEQEMIRNILQLDDRLVSSLMTPRRDVDFLDISQPVEQIFKKLRSSKH
SVFPLCQDHLNKVVGTVSAKALLNQAGNLNIQVIMGLSRSPIYVPESMKALRLLGYFKESGTEMAFIVDEYGDVQGLVTH
YDILEAIAGELSNNPKDLWTEQVEDGLLVDGLIPISELKNRLELSDFEGESESFQTLNGLVTWLIGRLPDAGEVVQYQQW
QFEVISVENNRIVSIKATQIADDIEGANS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=382, Percent_Identity=26.4397905759162, Blast_Score=144, Evalue=2e-34,
Organism=Escherichia coli, GI1790664, Length=429, Percent_Identity=29.8368298368298, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI145693175, Length=412, Percent_Identity=24.5145631067961, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI87082033, Length=346, Percent_Identity=26.0115606936416, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1788119, Length=271, Percent_Identity=30.6273062730627, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786879, Length=269, Percent_Identity=27.1375464684015, Blast_Score=95, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47019; Mature: 47019

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLLVGLIVLNGLFAMSEIALVAAKNSRLKRLAEKHRSAQVALELKENPTRFLSTIQI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
GITVIGLLSGIVGEATLSAPLAVQLELWGLDPTQANILSTTVVVVGITYFAIVVGELVPK
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFAQSQAENIAVLVALPIFWLSKIATPFVFALSASTEGILKLMGRGGEEDSVTEDDIHAL
HHHHHHHCCEEEHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHH
VKEGSESGVIERGEQEMIRNILQLDDRLVSSLMTPRRDVDFLDISQPVEQIFKKLRSSKH
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
SVFPLCQDHLNKVVGTVSAKALLNQAGNLNIQVIMGLSRSPIYVPESMKALRLLGYFKES
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHHHHC
GTEMAFIVDEYGDVQGLVTHYDILEAIAGELSNNPKDLWTEQVEDGLLVDGLIPISELKN
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCHHHHHH
RLELSDFEGESESFQTLNGLVTWLIGRLPDAGEVVQYQQWQFEVISVENNRIVSIKATQI
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEEEECCCEEEEEEHHHH
ADDIEGANS
HHHHCCCCC
>Mature Secondary Structure
MKILLLVGLIVLNGLFAMSEIALVAAKNSRLKRLAEKHRSAQVALELKENPTRFLSTIQI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
GITVIGLLSGIVGEATLSAPLAVQLELWGLDPTQANILSTTVVVVGITYFAIVVGELVPK
HHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFAQSQAENIAVLVALPIFWLSKIATPFVFALSASTEGILKLMGRGGEEDSVTEDDIHAL
HHHHHHHCCEEEHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHH
VKEGSESGVIERGEQEMIRNILQLDDRLVSSLMTPRRDVDFLDISQPVEQIFKKLRSSKH
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
SVFPLCQDHLNKVVGTVSAKALLNQAGNLNIQVIMGLSRSPIYVPESMKALRLLGYFKES
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEECCHHHHHHHHHHHHHHC
GTEMAFIVDEYGDVQGLVTHYDILEAIAGELSNNPKDLWTEQVEDGLLVDGLIPISELKN
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCHHHHHH
RLELSDFEGESESFQTLNGLVTWLIGRLPDAGEVVQYQQWQFEVISVENNRIVSIKATQI
HCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEEEECCCEEEEEEHHHH
ADDIEGANS
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]