| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is abgT [H]
Identifier: 218708680
GI number: 218708680
Start: 684084
End: 685646
Strand: Direct
Name: abgT [H]
Synonym: VS_0659
Alternate gene names: 218708680
Gene position: 684084-685646 (Clockwise)
Preceding gene: 218708679
Following gene: 218708681
Centisome position: 20.73
GC content: 46.19
Gene sequence:
>1563_bases ATGAGTAACCAAGCCGTAAAAAAAGCACCATCGACTGAGAAGATCAGTGGTATGGACCGCTTTCTAAACTTCATTGAACG CGCTGGCAACAAAATTCCAGATCCAGCAATTCTGTTCTTCTGGGCTCTAGTTATTGTATGGGTAGCATCTGCACTTTTAT CGAATCTTTCATTCGACTTAATCAACCCTCAAACGGGTGCTGCTCTTGAAGTAAACAACCTACTTACTGGTGAAGCGCTT GCTAGCTTCCTAGCGAATATGGTTACCACGTTCACAGGCTTCGCACCGCTAGGCATCGTACTTGTTGCTATGCTAGGTGT TGGCGTTGCTGACTCTTCAGGCTTCATTACGACTGGCCTTAAGAAGATGCTTAACTTCACGCCAGCTAAGTTGCTAACGC CAATGCTAATTCTTGTTGCTATCGTGTCTCACACAGCAGCAGATGCAGGTTACGTTCTAGTAATCCCTCTTGGCGGTATC ATCTTCCACGCAGCGGGTCGTCACCCTCTAGCGGGTATTGCAGCAGCGTTTGCTGGTGTATCCGGTGGTTTCTCAGCGAA CTTCATTCCTTCAGGTATTGACCCGCTACTCGCAGGTTTCACTCAAACAGCGGCAAACGTTCTTGACCCTGCATACGTGA TCAACCCTCTAGCGAACATCTTCTTTACTGGTTTGTCTTCAATTCTAATTGTGGCAATTGGTTGGTACGTTACAGAGAAA ATCATCGAGCCTCGTCTTGCTAATACGCCTGTCGATGAAGATGCAGAACAAGCACCTGATCTAGGTACGTTTACAGCCAT TGAATCTAAAGCATTCAAATTCGCTGGTTGGGCAATGGTTGCCGGTATTGGTCTGCTTATCGCGGCTCTAATGCCTGAAA ACTCAGCACTTCGTTCACCAGAAGGCGAACTAACGGCGTTCTCAGCACCAGTAATGAAGTCTATCGTTCCTCTGATCTTC ATCCTGTTTATTATTCCGGGTATCGTCTACGGCCGTGTAGCGGGTACCTTCAAGAATAGTAATGATGTTATCAAAGCAAT GTCTGAGACGATGGCAACGATGGGCGCATACATTGTAATGTCGTTCTTCTGTGCTCAGTTCCTATCAGCATTTGCTCAAT CAAACATCGGTACTATGCTGGCGCTTTACGGTGCTGAAGGCTTGAAAGCAATGGATCTTCCTGGTGAAGCAACGGTTGTT GGTATGATTCTACTAACGGCTTCAGTTAACCTTCTTGTAGGTTCAGCTTCAGCAAAGTGGGCACTGATTGGTCCTATCTT AGTTCCTATGTTAATGGTTGTGGGTATCTCTCCTGAGCTATCTCAAGCGGCTTACCGTGTAGGCGATTCAGTGTCTAACA TCATCTCTCCACTGATGGTGTTCTTCCCACTGGTTGTTGTTTACTGTCAACGTTACGTTAAGTCGACAGGTATCGGTACT CTAGCTTCTCTAATGATGCCATTCTCGATTGCTATGCTAATCGGTTGGTCTATCTTCTTGCTAGGTTACTGGGCTCTTGG TATCCCGCTAGGTATCCAAGCTCCTTACACTTACACAATGTAA
Upstream 100 bases:
>100_bases GCTTTTTAACAGCGACTTTAATAGAATATGTGCTGTACCAATAGGCCATGGTCAAAACTTATATTAGGCCTAAACAAACA ACATCACATATGGAGTTACA
Downstream 100 bases:
>100_bases GATTGAACTAAGCAAAATTAAGCTTTATTCATTGCTAAGCCCGCACCGAAATGTGCGGGCTATTTTTTGCTATTTTTTGC TATTTTTTTATCCAAGATTT
Product: putative p-aminobenzoyl-glutamate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSNQAVKKAPSTEKISGMDRFLNFIERAGNKIPDPAILFFWALVIVWVASALLSNLSFDLINPQTGAALEVNNLLTGEAL ASFLANMVTTFTGFAPLGIVLVAMLGVGVADSSGFITTGLKKMLNFTPAKLLTPMLILVAIVSHTAADAGYVLVIPLGGI IFHAAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAANVLDPAYVINPLANIFFTGLSSILIVAIGWYVTEK IIEPRLANTPVDEDAEQAPDLGTFTAIESKAFKFAGWAMVAGIGLLIAALMPENSALRSPEGELTAFSAPVMKSIVPLIF ILFIIPGIVYGRVAGTFKNSNDVIKAMSETMATMGAYIVMSFFCAQFLSAFAQSNIGTMLALYGAEGLKAMDLPGEATVV GMILLTASVNLLVGSASAKWALIGPILVPMLMVVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGT LASLMMPFSIAMLIGWSIFLLGYWALGIPLGIQAPYTYTM
Sequences:
>Translated_520_residues MSNQAVKKAPSTEKISGMDRFLNFIERAGNKIPDPAILFFWALVIVWVASALLSNLSFDLINPQTGAALEVNNLLTGEAL ASFLANMVTTFTGFAPLGIVLVAMLGVGVADSSGFITTGLKKMLNFTPAKLLTPMLILVAIVSHTAADAGYVLVIPLGGI IFHAAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAANVLDPAYVINPLANIFFTGLSSILIVAIGWYVTEK IIEPRLANTPVDEDAEQAPDLGTFTAIESKAFKFAGWAMVAGIGLLIAALMPENSALRSPEGELTAFSAPVMKSIVPLIF ILFIIPGIVYGRVAGTFKNSNDVIKAMSETMATMGAYIVMSFFCAQFLSAFAQSNIGTMLALYGAEGLKAMDLPGEATVV GMILLTASVNLLVGSASAKWALIGPILVPMLMVVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGT LASLMMPFSIAMLIGWSIFLLGYWALGIPLGIQAPYTYTM >Mature_519_residues SNQAVKKAPSTEKISGMDRFLNFIERAGNKIPDPAILFFWALVIVWVASALLSNLSFDLINPQTGAALEVNNLLTGEALA SFLANMVTTFTGFAPLGIVLVAMLGVGVADSSGFITTGLKKMLNFTPAKLLTPMLILVAIVSHTAADAGYVLVIPLGGII FHAAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAANVLDPAYVINPLANIFFTGLSSILIVAIGWYVTEKI IEPRLANTPVDEDAEQAPDLGTFTAIESKAFKFAGWAMVAGIGLLIAALMPENSALRSPEGELTAFSAPVMKSIVPLIFI LFIIPGIVYGRVAGTFKNSNDVIKAMSETMATMGAYIVMSFFCAQFLSAFAQSNIGTMLALYGAEGLKAMDLPGEATVVG MILLTASVNLLVGSASAKWALIGPILVPMLMVVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTL ASLMMPFSIAMLIGWSIFLLGYWALGIPLGIQAPYTYTM
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=492, Percent_Identity=34.5528455284553, Blast_Score=302, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 54733; Mature: 54602
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQAVKKAPSTEKISGMDRFLNFIERAGNKIPDPAILFFWALVIVWVASALLSNLSFDL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE INPQTGAALEVNNLLTGEALASFLANMVTTFTGFAPLGIVLVAMLGVGVADSSGFITTGL CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHH KKMLNFTPAKLLTPMLILVAIVSHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGV HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHC SGGFSANFIPSGIDPLLAGFTQTAANVLDPAYVINPLANIFFTGLSSILIVAIGWYVTEK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIEPRLANTPVDEDAEQAPDLGTFTAIESKAFKFAGWAMVAGIGLLIAALMPENSALRSP HHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EGELTAFSAPVMKSIVPLIFILFIIPGIVYGRVAGTFKNSNDVIKAMSETMATMGAYIVM CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SFFCAQFLSAFAQSNIGTMLALYGAEGLKAMDLPGEATVVGMILLTASVNLLVGSASAKW HHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHEEECCCCCH ALIGPILVPMLMVVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LASLMMPFSIAMLIGWSIFLLGYWALGIPLGIQAPYTYTM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC >Mature Secondary Structure SNQAVKKAPSTEKISGMDRFLNFIERAGNKIPDPAILFFWALVIVWVASALLSNLSFDL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEE INPQTGAALEVNNLLTGEALASFLANMVTTFTGFAPLGIVLVAMLGVGVADSSGFITTGL CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHH KKMLNFTPAKLLTPMLILVAIVSHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGV HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHC SGGFSANFIPSGIDPLLAGFTQTAANVLDPAYVINPLANIFFTGLSSILIVAIGWYVTEK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIEPRLANTPVDEDAEQAPDLGTFTAIESKAFKFAGWAMVAGIGLLIAALMPENSALRSP HHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC EGELTAFSAPVMKSIVPLIFILFIIPGIVYGRVAGTFKNSNDVIKAMSETMATMGAYIVM CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH SFFCAQFLSAFAQSNIGTMLALYGAEGLKAMDLPGEATVVGMILLTASVNLLVGSASAKW HHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHEEECCCCCH ALIGPILVPMLMVVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGT HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LASLMMPFSIAMLIGWSIFLLGYWALGIPLGIQAPYTYTM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]