| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is gltP [H]
Identifier: 218708671
GI number: 218708671
Start: 675216
End: 676490
Strand: Direct
Name: gltP [H]
Synonym: VS_0650
Alternate gene names: 218708671
Gene position: 675216-676490 (Clockwise)
Preceding gene: 218708670
Following gene: 218708672
Centisome position: 20.47
GC content: 45.57
Gene sequence:
>1275_bases ATGGACAAATCGCTCTCAAGTAAGATTTTTGTAGGCTTGTTTGCCGGCCTACTTATTGGTACTGCTATTCAGTACCTATT CAACGGTATTGCAGTATTTGATACTTACCTGCTAGGTCTAGCAGAAGGTGTCGGTGGTATGTTTGTCTCTTTGATCAAAC TATTGGTTGTTCCACTGGTATACGTATCTATCGTTTGCGGAATTGTTGAATTGAAAGACATCCGTTCTTTCGGTCGCCTA GGTGGTAAAACTTTTGCTCTTTACATTATCAACACCATCATCGCGATTTCTGCAGCCCTAACTGTTGGCCTTATTTTCCA ACCGGGTGCTGGTGCAGATTTAGCCGGAACGATCTCTGAGACAGTTCAACTAACAACAACTGAAACTCCAGATATCTTCT CTCTTGTTGTGAACATCGTTCCTAGCAACCCAGTTCAGGCGTTTGCAAGCGGCGACATGCTACAGATCATCTTCATGGCA ATTTTGACTGGTCTTGCTATTCAGGCTCTTGATTCACGTGGCGGTCCAGCGATCAAAACGTTCAAGATGGCTAACGAAAT CATGATGAAGCTTATCGGCCTGGTAATGAGCTTGGCACCATTTGGTGTATTCGCTCTGATGATTCAACTAGGTGCGACAC TGAACGCCGAGACACTTATGTCTGTAGCGGGCTACGTAGCGCTTGTTGTTGCGATGCTAGTGTTCTGGATTTTCTTCTTC TACCCAATGATGGTTGGTATCGCGACAGGTATTACGCCTAAGCAATTCCTACGTGCAACTCGTGAGCAAATCCTTTTCTC ACTATCGACGGCAAGTTCGAACGCGACTATCCCAGTAACAATGCGCACTCTAACTGAAAAGCTTGGTGTATCAAGATCTG TGGCTGGTTTCGGTGTTCCGCTGGGTGCGACAATGAACATGTCTGGTGTCTCTATCTACATCGCACTAGCGACAATGTTC GTAGCAAACGCATTCGGTCAACCAATCAACACTGCTGACATCTTTACTCTGGGTCTAACTATCTTGCTACTGTCTATCGG TGCTGGTGGTGTTCCAGGTGGTGGTGTTGTAATGGTAGGTGTTCTATTGCACCAACTAGGTTTACCACCAGAAGGTCTAG CTATCATTGCTGCGGTAGACCGTATCAACGATATGTTCTGTACTTCTTCTAACGTAGTGGGTGATACCGCGGTTAACACT ATCGTTGCTAAGTCTGAAGGCGAAATCGGCGTTGAAACAAACGAAGAAGCTGAGCTAAAGAAAGCAGAAGCGTAA
Upstream 100 bases:
>100_bases TGTTATCTTTGTATGTAAAATCCACTGCGATATAGCGATTTAACTCGCATATATAACTATAAAAGTACAAATTTCAAACA CAACAAACTGGAGAAGAACG
Downstream 100 bases:
>100_bases TCAGAGATTTTCCTCTATAGATGAAATCTAAGTGGAAAGCCTGAATAGACAAACGGAGCCTAAGTGGCTCCGTTTTTTAT TGGGTGATAACCCCAGTTAC
Product: sodium/glutamate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
>424_residues MDKSLSSKIFVGLFAGLLIGTAIQYLFNGIAVFDTYLLGLAEGVGGMFVSLIKLLVVPLVYVSIVCGIVELKDIRSFGRL GGKTFALYIINTIIAISAALTVGLIFQPGAGADLAGTISETVQLTTTETPDIFSLVVNIVPSNPVQAFASGDMLQIIFMA ILTGLAIQALDSRGGPAIKTFKMANEIMMKLIGLVMSLAPFGVFALMIQLGATLNAETLMSVAGYVALVVAMLVFWIFFF YPMMVGIATGITPKQFLRATREQILFSLSTASSNATIPVTMRTLTEKLGVSRSVAGFGVPLGATMNMSGVSIYIALATMF VANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVGVLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNT IVAKSEGEIGVETNEEAELKKAEA
Sequences:
>Translated_424_residues MDKSLSSKIFVGLFAGLLIGTAIQYLFNGIAVFDTYLLGLAEGVGGMFVSLIKLLVVPLVYVSIVCGIVELKDIRSFGRL GGKTFALYIINTIIAISAALTVGLIFQPGAGADLAGTISETVQLTTTETPDIFSLVVNIVPSNPVQAFASGDMLQIIFMA ILTGLAIQALDSRGGPAIKTFKMANEIMMKLIGLVMSLAPFGVFALMIQLGATLNAETLMSVAGYVALVVAMLVFWIFFF YPMMVGIATGITPKQFLRATREQILFSLSTASSNATIPVTMRTLTEKLGVSRSVAGFGVPLGATMNMSGVSIYIALATMF VANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVGVLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNT IVAKSEGEIGVETNEEAELKKAEA >Mature_424_residues MDKSLSSKIFVGLFAGLLIGTAIQYLFNGIAVFDTYLLGLAEGVGGMFVSLIKLLVVPLVYVSIVCGIVELKDIRSFGRL GGKTFALYIINTIIAISAALTVGLIFQPGAGADLAGTISETVQLTTTETPDIFSLVVNIVPSNPVQAFASGDMLQIIFMA ILTGLAIQALDSRGGPAIKTFKMANEIMMKLIGLVMSLAPFGVFALMIQLGATLNAETLMSVAGYVALVVAMLVFWIFFF YPMMVGIATGITPKQFLRATREQILFSLSTASSNATIPVTMRTLTEKLGVSRSVAGFGVPLGATMNMSGVSIYIALATMF VANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVGVLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNT IVAKSEGEIGVETNEEAELKKAEA
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=401, Percent_Identity=30.4239401496259, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI40254478, Length=442, Percent_Identity=27.8280542986425, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI169790839, Length=443, Percent_Identity=26.1851015801354, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI4827012, Length=284, Percent_Identity=31.6901408450704, Blast_Score=132, Evalue=7e-31, Organism=Homo sapiens, GI194239697, Length=257, Percent_Identity=31.9066147859922, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI5032093, Length=383, Percent_Identity=29.7650130548303, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI66773030, Length=393, Percent_Identity=26.2086513994911, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI223468566, Length=284, Percent_Identity=30.6338028169014, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI223468564, Length=256, Percent_Identity=30.859375, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI301601644, Length=141, Percent_Identity=36.8794326241135, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI262359914, Length=369, Percent_Identity=24.6612466124661, Blast_Score=94, Evalue=3e-19, Organism=Escherichia coli, GI1790514, Length=416, Percent_Identity=33.4134615384615, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1789947, Length=380, Percent_Identity=30, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1788024, Length=403, Percent_Identity=27.5434243176179, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789473, Length=237, Percent_Identity=30.379746835443, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71983106, Length=399, Percent_Identity=29.5739348370927, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71983099, Length=399, Percent_Identity=29.5739348370927, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17537407, Length=384, Percent_Identity=29.9479166666667, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71996953, Length=427, Percent_Identity=25.7611241217799, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI193206505, Length=421, Percent_Identity=24.7030878859857, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI193206654, Length=401, Percent_Identity=26.4339152119701, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17541374, Length=395, Percent_Identity=27.0886075949367, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24583025, Length=421, Percent_Identity=25.8907363420428, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI17137668, Length=421, Percent_Identity=25.8907363420428, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24583023, Length=421, Percent_Identity=25.8907363420428, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI281360481, Length=427, Percent_Identity=23.4192037470726, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI281360483, Length=433, Percent_Identity=23.5565819861432, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI17137666, Length=433, Percent_Identity=23.5565819861432, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 44314; Mature: 44314
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSLSSKIFVGLFAGLLIGTAIQYLFNGIAVFDTYLLGLAEGVGGMFVSLIKLLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVSIVCGIVELKDIRSFGRLGGKTFALYIINTIIAISAALTVGLIFQPGAGADLAGTISE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH TVQLTTTETPDIFSLVVNIVPSNPVQAFASGDMLQIIFMAILTGLAIQALDSRGGPAIKT CEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH FKMANEIMMKLIGLVMSLAPFGVFALMIQLGATLNAETLMSVAGYVALVVAMLVFWIFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YPMMVGIATGITPKQFLRATREQILFSLSTASSNATIPVTMRTLTEKLGVSRSVAGFGVP HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC LGATMNMSGVSIYIALATMFVANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVG CCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNTIVAKSEGEIGVETNEEAELK HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCHHHHH KAEA HCCC >Mature Secondary Structure MDKSLSSKIFVGLFAGLLIGTAIQYLFNGIAVFDTYLLGLAEGVGGMFVSLIKLLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVSIVCGIVELKDIRSFGRLGGKTFALYIINTIIAISAALTVGLIFQPGAGADLAGTISE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH TVQLTTTETPDIFSLVVNIVPSNPVQAFASGDMLQIIFMAILTGLAIQALDSRGGPAIKT CEEEEECCCCHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH FKMANEIMMKLIGLVMSLAPFGVFALMIQLGATLNAETLMSVAGYVALVVAMLVFWIFFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YPMMVGIATGITPKQFLRATREQILFSLSTASSNATIPVTMRTLTEKLGVSRSVAGFGVP HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC LGATMNMSGVSIYIALATMFVANAFGQPINTADIFTLGLTILLLSIGAGGVPGGGVVMVG CCCEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH VLLHQLGLPPEGLAIIAAVDRINDMFCTSSNVVGDTAVNTIVAKSEGEIGVETNEEAELK HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCCCCHHHHH KAEA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]