| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is engA
Identifier: 218708645
GI number: 218708645
Start: 645232
End: 646713
Strand: Direct
Name: engA
Synonym: VS_0623
Alternate gene names: 218708645
Gene position: 645232-646713 (Clockwise)
Preceding gene: 218708644
Following gene: 218708646
Centisome position: 19.56
GC content: 43.66
Gene sequence:
>1482_bases ATGGTACCTGTTGTTGCTCTAGTAGGGCGTCCGAACGTAGGTAAATCTACGTTATTTAACCGATTGACTCGAACTCGTGA TGCATTGGTTGCGGATTTCCCTGGCTTAACGCGTGACCGTAAATACGGTCATGCTCATTTTAGCGAGCATGACTTTATTG TTATCGACACTGGTGGTATCGACGGTACCGAAGAAGGTGTTGAAACTAAAATGGCTGAACAGTCGCTAGCGGCGATTGAT GAAGCTGATGTCGTTCTATTTATGGTAGATGGCCGTGCGGGTCTAACACCTTCAGACGTAGCTATTGCTAAGCACCTTCG TCAACTAGAAAAGCCTTCAATGCTAGTAGTAAACAAGGTTGATGGTATCGACCCTGATGCTGCAAGTGCTGATTTCTGGC AACTAGGCGTAGAAGACATGTACCAAATCGCTGCAGCGCACGGTCGTGGTGTAACAGCGTTGATTGATCTTGCTCTAAAC CCATTCGCTGAAGCGTTAAAAGCTGAGAATGGCGAAGTAAGCGATTTAACTGAATTTGAAGACGAAGAAGAAGAGCAAGT TGATTTCACTGAAGAAGAAGCGGAAGAAGAATTCAAGCGCCTTCAAGATCAACCGATTAAGCTAGCGATCATTGGTCGTC CTAACGTAGGTAAATCAACACTAACTAACCGTATTCTTGGTGAAGAACGTGTTGTTGTTTACGATATGCCAGGTACAACT CGTGACTCTATCTACATTCCGATGCAGCGTGATGAGCGTGAATACGTTCTGATTGATACTGCGGGTGTTCGTCGCCGTAA AAATATCAATGAAACAGTTGAGAAGTTCTCAGTGGTTAAAACACTGAAAGCGATTGAAGATGCTAACGTTGTATTACTGC TTATCGATGCTCGCGAGAACATCTCAGATCAAGATCTAAGCTTGTTAGGCTTTGCGTTGAATGCTGGTCGTTCAATTGTT ATTGCCGTAAACAAGTGGGATGGCCTAGATAACGACGTTAAAGATCGTGTTAAGAAAGAACTAGATCGTCGTTTAGGTTT CGTTGATTTCGCACGTATTCACTTTATCTCTGCACTTCACGGTACTGGTGTTGGTCACTTGTTTGAGTCTGTTCAAGAAG CTTATAAGTCAGCAACGACTCGTGTTGGTACTTCTGTACTTACTCGTATCATGAAGATGGCGACTGATGATCACCAACCA CCTATGGTTCGTGGTCGTCGTGTTAAATTGAAATACGCGCACGCTGGTGGCTACAACCCACCGATTATCGTTATCCACGG TAACCAAGTACGTAACTTGCCAGATTCATACAAACGATTCTTGATGAACTACTACCGTCGTTCACTAGAAATTATGGGTA CACCTATTCGCATTCAATTCCAGAACAGCGAGAACCCATTTGAAGCTAAGACTAACAAGCTGACAATTTCTCAAGAACGT AAACGTAAACGTATGATGAGCATGGTTAAAGGTCGCAAGTAA
Upstream 100 bases:
>100_bases GTTATAAATTAATAAACCGTGTGGTTATAGGTAAGAGTTTAAACTTGCGATCAAGTGCTTACCTATAACTACATTTAGAG AAGAAATTGTAGAGGTTGTT
Downstream 100 bases:
>100_bases ACCTTTCCAATAGATTTGATACCCGAGCCTGTCTCGGGTATTTTTTTAAGTAAAATTCACGTTATCTGATAATCGCGTCT TTGATTCCGTTATCAGCTAG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGIDGTEEGVETKMAEQSLAAID EADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNKVDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN PFAEALKAENGEVSDLTEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT RDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNAGRSIV IAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQP PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIMGTPIRIQFQNSENPFEAKTNKLTISQER KRKRMMSMVKGRK
Sequences:
>Translated_493_residues MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGIDGTEEGVETKMAEQSLAAID EADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNKVDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN PFAEALKAENGEVSDLTEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT RDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNAGRSIV IAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQP PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIMGTPIRIQFQNSENPFEAKTNKLTISQER KRKRMMSMVKGRK >Mature_493_residues MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGIDGTEEGVETKMAEQSLAAID EADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNKVDGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALN PFAEALKAENGEVSDLTEFEDEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT RDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLIDARENISDQDLSLLGFALNAGRSIV IAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALHGTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQP PMVRGRRVKLKYAHAGGYNPPIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIMGTPIRIQFQNSENPFEAKTNKLTISQER KRKRMMSMVKGRK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=498, Percent_Identity=70.8835341365462, Blast_Score=715, Evalue=0.0, Organism=Escherichia coli, GI1788919, Length=124, Percent_Identity=33.8709677419355, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI2367268, Length=165, Percent_Identity=31.5151515151515, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=198, Percent_Identity=26.7676767676768, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_VIBSL (B7VJU2)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002416266.1 - GeneID: 7160243 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0623 - HOGENOM: HBG592135 - OMA: KCEKAFD - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 55365; Mature: 55365
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC DGTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNKV CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECC DGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALNPFAEALKAENGEVSDLTEFE CCCCCCCCCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC DEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT CCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCC RDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLIDAREN CCCEEEECCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC ISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALH CCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCC PIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIMGTPIRIQFQNSENPFEAKTNKLTISQER CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEHHHH KRKRMMSMVKGRK HHHHHHHHHCCCC >Mature Secondary Structure MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGHAHFSEHDFIVIDTGGI CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC DGTEEGVETKMAEQSLAAIDEADVVLFMVDGRAGLTPSDVAIAKHLRQLEKPSMLVVNKV CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECC DGIDPDAASADFWQLGVEDMYQIAAAHGRGVTALIDLALNPFAEALKAENGEVSDLTEFE CCCCCCCCCCHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC DEEEEQVDFTEEEAEEEFKRLQDQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTT CCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCC RDSIYIPMQRDEREYVLIDTAGVRRRKNINETVEKFSVVKTLKAIEDANVVLLLIDAREN CCCEEEECCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC ISDQDLSLLGFALNAGRSIVIAVNKWDGLDNDVKDRVKKELDRRLGFVDFARIHFISALH CCCCCHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GTGVGHLFESVQEAYKSATTRVGTSVLTRIMKMATDDHQPPMVRGRRVKLKYAHAGGYNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCC PIIVIHGNQVRNLPDSYKRFLMNYYRRSLEIMGTPIRIQFQNSENPFEAKTNKLTISQER CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEHHHH KRKRMMSMVKGRK HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA