Click here to switch to the map view.

The map label for this gene is yaaA [C]

Identifier: 218708539

GI number: 218708539

Start: 524528

End: 525304

Strand: Direct

Name: yaaA [C]

Synonym: VS_0505

Alternate gene names: 218708539

Gene position: 524528-525304 (Clockwise)

Preceding gene: 218708538

Following gene: 218708542

Centisome position: 15.9

GC content: 45.43

Gene sequence:

>777_bases
ATGTTAGTTGTCGTTTCTCCAGCCAAGACATTAGATTACGAATCACCATTAGCGACTGAGCGCTTCAGCCAGCCAGAGTT
TGTTGAGCACTCTGCAGAGCTTATTGAAGTGTGTCGTAAGCTGACACCTGCTGATGTATCAGCATTGATGAAGGTAAGCG
ATAAGATTGCTGGGCTGAACGTAGCGCGCTTTGAGCAATGGAGTGAGACCTTTACCCAAGAGAATGCTCGCCAAGCTATT
TTGGCGTTCAAAGGTGACGTCTACACAGGCTTAGATGCTGAAACACTGTCGGACGATGATTTTGACTACGCACAGAATCA
CCTGCGCATGCTTTCTGGCCTATATGGGTTATTGAAGCCATTGGATTTGATGCAGCCTTACCGTCTAGAGATGGGCACAC
GCTTAGCTAATGAGCGTGGCACTAACTTGTACCAGTTCTGGGGCAATATCATCACAGATAAACTGAATGAAGCGTTGAAT
GCTCAAGGCGATAATGTGTTGATCAACCTAGCATCGAACGAATACTTTAAAGCGGTGAAGCCGAAGAGCCTTGATGGTCA
AATCATCACGCCAGTTTTTAAAGATTGCAAGAATGGCCAGTACAAGGTGATCAGTTTTTACGCGAAGAAAGCGCGTGGCA
TGATGGCTCGCTACATCATTGAAAATAAAATCGATTCAGTTGAAGCGTTGACCAGGTTTGATACTGCGGGTTACTACTTC
GTTGAAGAAGAGTCGAACGCGAAAGAGTTAGTCTTCAAGCGTGAAGAGCAAAACTAA

Upstream 100 bases:

>100_bases
AGATCTGTCTATCAAAGTAATAGGAAGAGTCATAAAGACAAGTTGATGTTTTTTCTATACTCTAGCTGCATCCAGTTAGA
TAACCGATTAGGGTAAAGTT

Downstream 100 bases:

>100_bases
TAGCTCTTGGTTAATTAGTCACTCTTGGTTAACGAGTTACTTCGACTTTAGCCTGTAATTAAAATTAGAGACGAATTATT
TAGCCTGATAACAGGCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MLVVVSPAKTLDYESPLATERFSQPEFVEHSAELIEVCRKLTPADVSALMKVSDKIAGLNVARFEQWSETFTQENARQAI
LAFKGDVYTGLDAETLSDDDFDYAQNHLRMLSGLYGLLKPLDLMQPYRLEMGTRLANERGTNLYQFWGNIITDKLNEALN
AQGDNVLINLASNEYFKAVKPKSLDGQIITPVFKDCKNGQYKVISFYAKKARGMMARYIIENKIDSVEALTRFDTAGYYF
VEEESNAKELVFKREEQN

Sequences:

>Translated_258_residues
MLVVVSPAKTLDYESPLATERFSQPEFVEHSAELIEVCRKLTPADVSALMKVSDKIAGLNVARFEQWSETFTQENARQAI
LAFKGDVYTGLDAETLSDDDFDYAQNHLRMLSGLYGLLKPLDLMQPYRLEMGTRLANERGTNLYQFWGNIITDKLNEALN
AQGDNVLINLASNEYFKAVKPKSLDGQIITPVFKDCKNGQYKVISFYAKKARGMMARYIIENKIDSVEALTRFDTAGYYF
VEEESNAKELVFKREEQN
>Mature_258_residues
MLVVVSPAKTLDYESPLATERFSQPEFVEHSAELIEVCRKLTPADVSALMKVSDKIAGLNVARFEQWSETFTQENARQAI
LAFKGDVYTGLDAETLSDDDFDYAQNHLRMLSGLYGLLKPLDLMQPYRLEMGTRLANERGTNLYQFWGNIITDKLNEALN
AQGDNVLINLASNEYFKAVKPKSLDGQIITPVFKDCKNGQYKVISFYAKKARGMMARYIIENKIDSVEALTRFDTAGYYF
VEEESNAKELVFKREEQN

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=67.704280155642, Blast_Score=377, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y505_VIBSL (B7VJ56)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002416160.1
- GeneID:   7160137
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0505
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29332; Mature: 29332

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVVVSPAKTLDYESPLATERFSQPEFVEHSAELIEVCRKLTPADVSALMKVSDKIAGLN
CEEEECCHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
VARFEQWSETFTQENARQAILAFKGDVYTGLDAETLSDDDFDYAQNHLRMLSGLYGLLKP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTRLANERGTNLYQFWGNIITDKLNEALNAQGDNVLINLASNEYFKAVK
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCC
PKSLDGQIITPVFKDCKNGQYKVISFYAKKARGMMARYIIENKIDSVEALTRFDTAGYYF
CCCCCCCEECHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VEEESNAKELVFKREEQN
EECCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLVVVSPAKTLDYESPLATERFSQPEFVEHSAELIEVCRKLTPADVSALMKVSDKIAGLN
CEEEECCHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
VARFEQWSETFTQENARQAILAFKGDVYTGLDAETLSDDDFDYAQNHLRMLSGLYGLLKP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LDLMQPYRLEMGTRLANERGTNLYQFWGNIITDKLNEALNAQGDNVLINLASNEYFKAVK
HHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCC
PKSLDGQIITPVFKDCKNGQYKVISFYAKKARGMMARYIIENKIDSVEALTRFDTAGYYF
CCCCCCCEECHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VEEESNAKELVFKREEQN
EECCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA