| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708528
Identifier: 218708528
GI number: 218708528
Start: 515848
End: 515991
Strand: Direct
Name: 218708528
Synonym: VS_0493
Alternate gene names: NA
Gene position: 515848-515991 (Clockwise)
Preceding gene: 218708520
Following gene: 218708529
Centisome position: 15.64
GC content: 43.06
Gene sequence:
>144_bases TTGATGCGGCTGGCCTTAAGATTTATGGAGAAGGTGAAGTCAAAAAAATATGGGACGGATGGCAAGCGTAGAGTTTTGCG TAAGCTGCATATTACTGTCGATACAGGCACTCATGAAATTATTGCAGCCGAGCGAAGTTTATAG
Upstream 100 bases:
>100_bases TCCGTTAAATTGTCCACATTACACTTGCCTCAGTCGTAGAGTAAAGCAAGCTGAGTTCTCATTAAGACTAAAACGAGATG AGCAATACAGCATTTAGCCA
Downstream 100 bases:
>100_bases ATAGGGAAGTACTTCCGAACTTACAGAAACAAACATGTAGAAGTATCCTTGAGGTGTCTGGTGAGGGCGATTACGACACG AGAACCGGGCTACCCTCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MMRLALRFMEKVKSKKYGTDGKRRVLRKLHITVDTGTHEIIAAERSL
Sequences:
>Translated_47_residues MMRLALRFMEKVKSKKYGTDGKRRVLRKLHITVDTGTHEIIAAERSL >Mature_47_residues MMRLALRFMEKVKSKKYGTDGKRRVLRKLHITVDTGTHEIIAAERSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5486; Mature: 5486
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLALRFMEKVKSKKYGTDGKRRVLRKLHITVDTGTHEIIAAERSL CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCC >Mature Secondary Structure MMRLALRFMEKVKSKKYGTDGKRRVLRKLHITVDTGTHEIIAAERSL CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA