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The map label for this gene is 218708365

Identifier: 218708365

GI number: 218708365

Start: 319195

End: 320637

Strand: Direct

Name: 218708365

Synonym: VS_0325

Alternate gene names: NA

Gene position: 319195-320637 (Clockwise)

Preceding gene: 218708364

Following gene: 218708366

Centisome position: 9.67

GC content: 41.51

Gene sequence:

>1443_bases
ATGAATTTTAAAGCGATTTTAGACAACATAAAGCCAACGAATAATAACGGTAGTTCTCAAGTTGTCCTTTTGGGCAATGA
TACCGTTTATATTTCATCGGCTGAGTCAGAACCTCAAGTCACCAGCATTCCTGTGGTAAATGGTGACTGGGAAAGTGCGC
TGAAAAAATTGCTGAGCAGTGAGTCGCTTACCAGTGATTGCCTTCAGCTAATTGTTTGTGCTAACTACTACCAAACTTAT
CAAATTGATAAACCGGACATTCCACAGAGTGAATGGTCGGTTGCATTGCCTTTTCTATTGAAAGATCTGATCTCTGAAAG
GGTGACTGAGATTACAGCGAGTGCGGTAGCGCTACCGACCTCGAATAAGCTACAAGTGTATGTTTTGCCTAAAAAGCTAT
TGGACAAGCTTGTAAGTATTACTAATTCAGCACAAGTTGATCTTAAAGGTATTGCTCCCGAAGATGAAGTTTGGGGCTAC
AGTGCTGGTGAGCTCTCTAATTTCATTCTTTTACAACGCAGCCCTAACTCACATTTTAAGCTTGGTGCATTTGTTGAAAA
CACGGTTTGCTTCCAAAGAACAATCCGCAGTGTTGTCCCCCCCTTAACTGGTACCGCATCAAGTGCATTGCAGTTGGATG
GTCTAGCTTTAGAGCTCCAAAGGTCGATTGATTACCTTTCTTCTCAAATTAAAGGCACCCAACTTCATCAGTTAAAAATA
TGCTGTGATGAGGAAGATGAAGCTGAATTGCAGAGCGTGTTAAATAGCACATTGAGTTCGACCGTTTCTTTACTTGTTGA
AGGTGAGCGCGAAAATTCAGAGAAATGGTTAGTTACGCTCGCGGCTGAAAAGAATGTTTTTAACGTTAATCTCTACCCAG
AGCACCTTAAGCCTAAAAAAGAGTATTTCACTCTAGTGAATGTGGTTATGGTTTGGGGGCTTGTGTGTACCTTGTTGCTT
GGCAGTTATTGTGTAATGCAGTATCAAGCATCGAGTTTGGATGAAGAGCTAGCAGCTTTACAATATGACTTGAATCAGCT
TAACCAAGAAGTTAACCAATTAAATAGTAAGTTGGTTCAACATAAACCGTCTCCAGTGAAAGTAGCTGCGGTTGCTCGTC
TCACTAGTGAGATACAAGCGAATAAAGAGGCTTTGAAGGCGGTCGGTCAATACGATGAATCCCAGCAAGTCGGGTATTCT
GGTGTTATGAATTCCTTCGCTAAATTAGGGCGAAATGATATTTCGCTTTCGCATATCTACATGACTCACGAGACCCTAGA
GCTTCGCGGTTTGGCTCGTGACGCTAATGTTGTTCCAAACTGGATTGGTCAGTTTAAAAATGAACTTAATTTAGTCGGGC
GCACCTTTGAAAAGATAAAGATAGGTCGTAATGAGCAAGATGTGGTGACGTTTGAGTTAAGTACTCATAGGGAGAGTGAA
TAA

Upstream 100 bases:

>100_bases
AAATAATTCCCTTGCCTACTCAAGGGGAAAAGACAGTGAAAGCTGAATCCGTTGTAAAAGTCGGTCGAAGAAATCGATGG
CGTAAGAGTAATAGTTAAGC

Downstream 100 bases:

>100_bases
TGCAACTGTGGAACCAGCTTAGCGATAAGTTCCTTGCATTAAGCCTGAGAGAGAAATGGCTACTTTTCGTGTGTGGTCTA
GTGGGCTTATCCATGCTTGT

Product: MSHA biogenesis protein MshI

Products: NA

Alternate protein names: Fimbrial Assembly Family Protein; Msha Biogenesis Protein Mshi; Biogenesis Protein MshI; MSHA Biogenesis; Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MNFKAILDNIKPTNNNGSSQVVLLGNDTVYISSAESEPQVTSIPVVNGDWESALKKLLSSESLTSDCLQLIVCANYYQTY
QIDKPDIPQSEWSVALPFLLKDLISERVTEITASAVALPTSNKLQVYVLPKKLLDKLVSITNSAQVDLKGIAPEDEVWGY
SAGELSNFILLQRSPNSHFKLGAFVENTVCFQRTIRSVVPPLTGTASSALQLDGLALELQRSIDYLSSQIKGTQLHQLKI
CCDEEDEAELQSVLNSTLSSTVSLLVEGERENSEKWLVTLAAEKNVFNVNLYPEHLKPKKEYFTLVNVVMVWGLVCTLLL
GSYCVMQYQASSLDEELAALQYDLNQLNQEVNQLNSKLVQHKPSPVKVAAVARLTSEIQANKEALKAVGQYDESQQVGYS
GVMNSFAKLGRNDISLSHIYMTHETLELRGLARDANVVPNWIGQFKNELNLVGRTFEKIKIGRNEQDVVTFELSTHRESE

Sequences:

>Translated_480_residues
MNFKAILDNIKPTNNNGSSQVVLLGNDTVYISSAESEPQVTSIPVVNGDWESALKKLLSSESLTSDCLQLIVCANYYQTY
QIDKPDIPQSEWSVALPFLLKDLISERVTEITASAVALPTSNKLQVYVLPKKLLDKLVSITNSAQVDLKGIAPEDEVWGY
SAGELSNFILLQRSPNSHFKLGAFVENTVCFQRTIRSVVPPLTGTASSALQLDGLALELQRSIDYLSSQIKGTQLHQLKI
CCDEEDEAELQSVLNSTLSSTVSLLVEGERENSEKWLVTLAAEKNVFNVNLYPEHLKPKKEYFTLVNVVMVWGLVCTLLL
GSYCVMQYQASSLDEELAALQYDLNQLNQEVNQLNSKLVQHKPSPVKVAAVARLTSEIQANKEALKAVGQYDESQQVGYS
GVMNSFAKLGRNDISLSHIYMTHETLELRGLARDANVVPNWIGQFKNELNLVGRTFEKIKIGRNEQDVVTFELSTHRESE
>Mature_480_residues
MNFKAILDNIKPTNNNGSSQVVLLGNDTVYISSAESEPQVTSIPVVNGDWESALKKLLSSESLTSDCLQLIVCANYYQTY
QIDKPDIPQSEWSVALPFLLKDLISERVTEITASAVALPTSNKLQVYVLPKKLLDKLVSITNSAQVDLKGIAPEDEVWGY
SAGELSNFILLQRSPNSHFKLGAFVENTVCFQRTIRSVVPPLTGTASSALQLDGLALELQRSIDYLSSQIKGTQLHQLKI
CCDEEDEAELQSVLNSTLSSTVSLLVEGERENSEKWLVTLAAEKNVFNVNLYPEHLKPKKEYFTLVNVVMVWGLVCTLLL
GSYCVMQYQASSLDEELAALQYDLNQLNQEVNQLNSKLVQHKPSPVKVAAVARLTSEIQANKEALKAVGQYDESQQVGYS
GVMNSFAKLGRNDISLSHIYMTHETLELRGLARDANVVPNWIGQFKNELNLVGRTFEKIKIGRNEQDVVTFELSTHRESE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53334; Mature: 53334

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKAILDNIKPTNNNGSSQVVLLGNDTVYISSAESEPQVTSIPVVNGDWESALKKLLSS
CCHHHHHHCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCC
ESLTSDCLQLIVCANYYQTYQIDKPDIPQSEWSVALPFLLKDLISERVTEITASAVALPT
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHEECCC
SNKLQVYVLPKKLLDKLVSITNSAQVDLKGIAPEDEVWGYSAGELSNFILLQRSPNSHFK
CCCEEEEEECHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCEEEEEECCCCCEE
LGAFVENTVCFQRTIRSVVPPLTGTASSALQLDGLALELQRSIDYLSSQIKGTQLHQLKI
EHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEEE
CCDEEDEAELQSVLNSTLSSTVSLLVEGERENSEKWLVTLAAEKNVFNVNLYPEHLKPKK
ECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCEEEEEECHHHCCCHH
EYFTLVNVVMVWGLVCTLLLGSYCVMQYQASSLDEELAALQYDLNQLNQEVNQLNSKLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKPSPVKVAAVARLTSEIQANKEALKAVGQYDESQQVGYSGVMNSFAKLGRNDISLSHIY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEE
MTHETLELRGLARDANVVPNWIGQFKNELNLVGRTFEKIKIGRNEQDVVTFELSTHRESE
EEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MNFKAILDNIKPTNNNGSSQVVLLGNDTVYISSAESEPQVTSIPVVNGDWESALKKLLSS
CCHHHHHHCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEEEEECCCHHHHHHHHHCC
ESLTSDCLQLIVCANYYQTYQIDKPDIPQSEWSVALPFLLKDLISERVTEITASAVALPT
CCHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHEECCC
SNKLQVYVLPKKLLDKLVSITNSAQVDLKGIAPEDEVWGYSAGELSNFILLQRSPNSHFK
CCCEEEEEECHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCEEEEEECCCCCEE
LGAFVENTVCFQRTIRSVVPPLTGTASSALQLDGLALELQRSIDYLSSQIKGTQLHQLKI
EHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEEEE
CCDEEDEAELQSVLNSTLSSTVSLLVEGERENSEKWLVTLAAEKNVFNVNLYPEHLKPKK
ECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCEEEEEECHHHCCCHH
EYFTLVNVVMVWGLVCTLLLGSYCVMQYQASSLDEELAALQYDLNQLNQEVNQLNSKLVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKPSPVKVAAVARLTSEIQANKEALKAVGQYDESQQVGYSGVMNSFAKLGRNDISLSHIY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCCCCEEEEEE
MTHETLELRGLARDANVVPNWIGQFKNELNLVGRTFEKIKIGRNEQDVVTFELSTHRESE
EEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA