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The map label for this gene is gfcC [H]

Identifier: 218708273

GI number: 218708273

Start: 202504

End: 203445

Strand: Direct

Name: gfcC [H]

Synonym: VS_0210

Alternate gene names: 218708273

Gene position: 202504-203445 (Clockwise)

Preceding gene: 218708272

Following gene: 218708274

Centisome position: 6.14

GC content: 42.14

Gene sequence:

>942_bases
ATGATGAATTATATTAGTCACGTATCAAAAATGACGGGACGTCGGTTGCCTGATGTGAGATCTACGTTAACGATGAGAGC
TCTGTTGACGTTGAGTGCACTGTTCTCTCTGTGTACTTTTAGCTACGTTTCTGCGGCTTCTAACGTTGTTACGCCTGATG
GCTCTTCTTTAATGAAAACAACAATCGAGCTTCCTCTTCAAGGTGTGACGCTTGAGTATAAAGCCAATGTTCGACTACTT
CAGGTACTAGACGACGCGAATGCTAGCTCTAACGTGAACGATAACAGCAGTATTGGGTACTTCCCCCTTTCTGCCCAATT
GTTTGATAAAACCAATGCTGAATCGAATAAAGCTAACAAAGATATCGAAGCCAAAAAGCGCAATGTATTTAACCAACTTG
ACGCTTTTTCGGTAGAAGAGCCAGAAGCAAAATTAGTAAAGCAACAATTAGCTTCTTTCCAATATCTCAATCGAGTTTTT
ATTGAATTAGACCGTAATGCGGTTATCTCGCAATCAGACAAGAACCCGTTACTTGTTTCAAGTTCTCATACTAACAAACC
GTCGTCTGCTGCCATAAAAAGAGCATCTACTAGCCAAACTCAAGCCTTTTCTCTGTACTTACCACAACGACCAACGTCAA
TTCAGTTGATGGGTGCAATGAAAGCGTCGGTAACAATGAATCTGATTGAGCATGGAACCTTGAATGATTATCTCGATGCA
TTACCGAACGGATTTATTGGTGAATCTGCAGATAAAAGCGTGGCGTATGTTGTTCAGCCAGATGGCGTGGTGCGAACCAT
TCAATACGCTTACTGGAACGAACAATCGGCTTACTTCGCACCAGGTGCCATCGTATTTATGGCGTTTTACTCTTTGCCAT
CGGAATACTCAACGTTGAACCAAGATATCGTCGATTTGCTACGTCATAAGGTTGGCCTGTAA

Upstream 100 bases:

>100_bases
GGTCAAAACCATACAGTATTTGGGCCCTGATATGACAAGGCTTGAGTTAACCGTCCTTAAGCATTATCAAAGCAATTAAC
GAACAGGGTAATGAACTAAA

Downstream 100 bases:

>100_bases
TGCTGAAACAGAAATCATTCCCTTTATCGGCAGTGTGTACATCGGTTACCTGTGCCTTGTTAATGACCAGTAGTGTGTCG
GTTTTTGCCGAAACAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Group 4 capsule protein C homolog [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MMNYISHVSKMTGRRLPDVRSTLTMRALLTLSALFSLCTFSYVSAASNVVTPDGSSLMKTTIELPLQGVTLEYKANVRLL
QVLDDANASSNVNDNSSIGYFPLSAQLFDKTNAESNKANKDIEAKKRNVFNQLDAFSVEEPEAKLVKQQLASFQYLNRVF
IELDRNAVISQSDKNPLLVSSSHTNKPSSAAIKRASTSQTQAFSLYLPQRPTSIQLMGAMKASVTMNLIEHGTLNDYLDA
LPNGFIGESADKSVAYVVQPDGVVRTIQYAYWNEQSAYFAPGAIVFMAFYSLPSEYSTLNQDIVDLLRHKVGL

Sequences:

>Translated_313_residues
MMNYISHVSKMTGRRLPDVRSTLTMRALLTLSALFSLCTFSYVSAASNVVTPDGSSLMKTTIELPLQGVTLEYKANVRLL
QVLDDANASSNVNDNSSIGYFPLSAQLFDKTNAESNKANKDIEAKKRNVFNQLDAFSVEEPEAKLVKQQLASFQYLNRVF
IELDRNAVISQSDKNPLLVSSSHTNKPSSAAIKRASTSQTQAFSLYLPQRPTSIQLMGAMKASVTMNLIEHGTLNDYLDA
LPNGFIGESADKSVAYVVQPDGVVRTIQYAYWNEQSAYFAPGAIVFMAFYSLPSEYSTLNQDIVDLLRHKVGL
>Mature_313_residues
MMNYISHVSKMTGRRLPDVRSTLTMRALLTLSALFSLCTFSYVSAASNVVTPDGSSLMKTTIELPLQGVTLEYKANVRLL
QVLDDANASSNVNDNSSIGYFPLSAQLFDKTNAESNKANKDIEAKKRNVFNQLDAFSVEEPEAKLVKQQLASFQYLNRVF
IELDRNAVISQSDKNPLLVSSSHTNKPSSAAIKRASTSQTQAFSLYLPQRPTSIQLMGAMKASVTMNLIEHGTLNDYLDA
LPNGFIGESADKSVAYVVQPDGVVRTIQYAYWNEQSAYFAPGAIVFMAFYSLPSEYSTLNQDIVDLLRHKVGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjbG [H]

Homologues:

Organism=Escherichia coli, GI1787220, Length=277, Percent_Identity=25.6317689530686, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010425 [H]

Pfam domain/function: PF06251 DUF1017 [H]

EC number: NA

Molecular weight: Translated: 34551; Mature: 34551

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNYISHVSKMTGRRLPDVRSTLTMRALLTLSALFSLCTFSYVSAASNVVTPDGSSLMKT
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TIELPLQGVTLEYKANVRLLQVLDDANASSNVNDNSSIGYFPLSAQLFDKTNAESNKANK
HHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCC
DIEAKKRNVFNQLDAFSVEEPEAKLVKQQLASFQYLNRVFIELDRNAVISQSDKNPLLVS
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEE
SSHTNKPSSAAIKRASTSQTQAFSLYLPQRPTSIQLMGAMKASVTMNLIEHGTLNDYLDA
CCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHH
LPNGFIGESADKSVAYVVQPDGVVRTIQYAYWNEQSAYFAPGAIVFMAFYSLPSEYSTLN
CCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCEECCHHHHHHHHHHCCHHHHHHH
QDIVDLLRHKVGL
HHHHHHHHHHHCC
>Mature Secondary Structure
MMNYISHVSKMTGRRLPDVRSTLTMRALLTLSALFSLCTFSYVSAASNVVTPDGSSLMKT
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TIELPLQGVTLEYKANVRLLQVLDDANASSNVNDNSSIGYFPLSAQLFDKTNAESNKANK
HHHCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCC
DIEAKKRNVFNQLDAFSVEEPEAKLVKQQLASFQYLNRVFIELDRNAVISQSDKNPLLVS
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEE
SSHTNKPSSAAIKRASTSQTQAFSLYLPQRPTSIQLMGAMKASVTMNLIEHGTLNDYLDA
CCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHH
LPNGFIGESADKSVAYVVQPDGVVRTIQYAYWNEQSAYFAPGAIVFMAFYSLPSEYSTLN
CCCCCCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCEECCHHHHHHHHHHCCHHHHHHH
QDIVDLLRHKVGL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]