Click here to switch to the map view.

The map label for this gene is yibN [H]

Identifier: 218708270

GI number: 218708270

Start: 200723

End: 201157

Strand: Reverse

Name: yibN [H]

Synonym: VS_0207

Alternate gene names: 218708270

Gene position: 201157-200723 (Counterclockwise)

Preceding gene: 218708286

Following gene: 218708269

Centisome position: 6.1

GC content: 42.53

Gene sequence:

>435_bases
ATGCAAGAGTTAGTTCCATTTGTTCAAGAGAATATGATTTTAGCCATCGTATGGATCGGCTTGGTTGTTGCCATCATTGC
GAACGTTATCAAGACATCAAACGCAGCTTACAAAGAGATCACGGCAGCACAAACCACACACATGATTAACCGTGAAAACG
GTATTGTGGTTGATATTCGTACTAAAGATGAGTTCAAAAAGGGCCATATTACTGACGCAGTTCACATTTTGCCGTCAGAT
ATCAAAGCAAATAGCTTTGGTAGCCTTGAAAGCCACAAAGCCGACCCAATCATCGTAGTATGTAAGACAGGTCAAACAGC
TCAAGAAAGCGCTAACCTACTGGTTAAAGCTGGTTTCGAAAACGTAAGCGTGCTGAAAAGCGGCTTAGTGGCTTGGAGCG
AAGCTAACCTACCTTTGGTGAAAGGTAAAAAGTAG

Upstream 100 bases:

>100_bases
ACTCACACACAACAATATGCTTCCTCTATATTCTCCTCCCCTTTATAGCTATACTCCTACCCTATAATTTTTCGCCCAAT
AACGAATAAGAGTTCAAGAT

Downstream 100 bases:

>100_bases
TTAAAGGTAAGCTGACCTAACTAAACGAATATGACTTTAAGGTTTTGTTCAACAGAGATGGCGAACGAAACCTAATTATA
AATTTTTAAGGACAAGAAAA

Product: putative rhodanese-like sulfurtransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQELVPFVQENMILAIVWIGLVVAIIANVIKTSNAAYKEITAAQTTHMINRENGIVVDIRTKDEFKKGHITDAVHILPSD
IKANSFGSLESHKADPIIVVCKTGQTAQESANLLVKAGFENVSVLKSGLVAWSEANLPLVKGKK

Sequences:

>Translated_144_residues
MQELVPFVQENMILAIVWIGLVVAIIANVIKTSNAAYKEITAAQTTHMINRENGIVVDIRTKDEFKKGHITDAVHILPSD
IKANSFGSLESHKADPIIVVCKTGQTAQESANLLVKAGFENVSVLKSGLVAWSEANLPLVKGKK
>Mature_144_residues
MQELVPFVQENMILAIVWIGLVVAIIANVIKTSNAAYKEITAAQTTHMINRENGIVVDIRTKDEFKKGHITDAVHILPSD
IKANSFGSLESHKADPIIVVCKTGQTAQESANLLVKAGFENVSVLKSGLVAWSEANLPLVKGKK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=48.951048951049, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15603; Mature: 15603

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQELVPFVQENMILAIVWIGLVVAIIANVIKTSNAAYKEITAAQTTHMINRENGIVVDIR
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCEEEEEE
TKDEFKKGHITDAVHILPSDIKANSFGSLESHKADPIIVVCKTGQTAQESANLLVKAGFE
CCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCEEEEECCC
NVSVLKSGLVAWSEANLPLVKGKK
HHHHHHHHHHEECCCCCCEECCCC
>Mature Secondary Structure
MQELVPFVQENMILAIVWIGLVVAIIANVIKTSNAAYKEITAAQTTHMINRENGIVVDIR
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCEEEEEE
TKDEFKKGHITDAVHILPSDIKANSFGSLESHKADPIIVVCKTGQTAQESANLLVKAGFE
CCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHCCEEEEECCC
NVSVLKSGLVAWSEANLPLVKGKK
HHHHHHHHHHEECCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]