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The map label for this gene is rpiA [H]

Identifier: 218708230

GI number: 218708230

Start: 164021

End: 164830

Strand: Reverse

Name: rpiA [H]

Synonym: VS_0167

Alternate gene names: 218708230

Gene position: 164830-164021 (Counterclockwise)

Preceding gene: 218708231

Following gene: 218708229

Centisome position: 5.0

GC content: 45.8

Gene sequence:

>810_bases
TTGGTGAATCAGCACCAGCAGAACAACTCTTCGAAATGTTTGGATTTACGGTTGAAAATATCGTTGAAAAATCCCTATCG
GTTCTGGAGAAGTAATATGAGCATGGCACAACGCTTTATTGAAAACCAAAGCCAAGACTGCCTGCGAACTAAGGCTGCAA
AAGTAGCCTTAGAGCAAGTCCTAAAAACGCTAACACCTTCTAGCGTGATTGGTATCGGCACTGGTGCAACAGTTGAAGTT
TTCATTCAACTATTGAAAGAAAGTGGCGCTGAGTTTGCTCATTGCGTATCCAGTTCGGTTCGCTCAAGTCGAGCTTTATC
CTCTGCAGGCCTGAATGAGATATCCATATCTGAATGTGGCCGTGTTGATTTCTACATTGATGGCATTGATGAAGGTCTTA
CAACCGGCATGACCGTGAAAGGTGGTGGTGCAGCACTGGCTCGTGAAAAAGTACTCGCGACGCTTGCTCTAAGCTTCATC
ACCATCGCAGATAGCGGTCGATTGGTCACTCAACTTGGAAAGTTCCCACTCCCTGTAGAGGTTTTACCTGCCGCACAAAC
CGCTGTGTTTAATGCCTTACAAAGCCTTGGTGGACACCCGACGTTGCGCCAAGACTGCACCACTGATAACGGCAATATCA
TTCTCGATGTTGCTCATTTGGACATCGCTGAACCAAAGCGATTAGAACTCCAAATTAACGCTATTCCTGGCGTCGTCGAG
AACGGTATTTTCGCGCAAAGAACGGCCGATTTCATGGCTTTTTCGAATGCAGAAGGTACGTATTTATTATCAAAGCAACA
CGTTCAATAG

Upstream 100 bases:

>100_bases
CCAAGCCATGTTACAGCACGAGTTGCCATAGAGGCTGGTATCCGTGACTACTGGTTCAAGTATGTCGGGCTACACGGCGA
CATTGTGGGAATGACAAGCT

Downstream 100 bases:

>100_bases
CTGGGATTTATAATCAAAATGAGACCTCGCTTGCAAGTCTATTTACAAGCATGTCAGTAAGGATAATTTAGGAATAAAAC
ATGACGGAAAGCAATTTTTC

Product: putative ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MVNQHQQNNSSKCLDLRLKISLKNPYRFWRSNMSMAQRFIENQSQDCLRTKAAKVALEQVLKTLTPSSVIGIGTGATVEV
FIQLLKESGAEFAHCVSSSVRSSRALSSAGLNEISISECGRVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFI
TIADSGRLVTQLGKFPLPVEVLPAAQTAVFNALQSLGGHPTLRQDCTTDNGNIILDVAHLDIAEPKRLELQINAIPGVVE
NGIFAQRTADFMAFSNAEGTYLLSKQHVQ

Sequences:

>Translated_269_residues
MVNQHQQNNSSKCLDLRLKISLKNPYRFWRSNMSMAQRFIENQSQDCLRTKAAKVALEQVLKTLTPSSVIGIGTGATVEV
FIQLLKESGAEFAHCVSSSVRSSRALSSAGLNEISISECGRVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFI
TIADSGRLVTQLGKFPLPVEVLPAAQTAVFNALQSLGGHPTLRQDCTTDNGNIILDVAHLDIAEPKRLELQINAIPGVVE
NGIFAQRTADFMAFSNAEGTYLLSKQHVQ
>Mature_269_residues
MVNQHQQNNSSKCLDLRLKISLKNPYRFWRSNMSMAQRFIENQSQDCLRTKAAKVALEQVLKTLTPSSVIGIGTGATVEV
FIQLLKESGAEFAHCVSSSVRSSRALSSAGLNEISISECGRVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFI
TIADSGRLVTQLGKFPLPVEVLPAAQTAVFNALQSLGGHPTLRQDCTTDNGNIILDVAHLDIAEPKRLELQINAIPGVVE
NGIFAQRTADFMAFSNAEGTYLLSKQHVQ

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=222, Percent_Identity=30.6306306306306, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1789280, Length=222, Percent_Identity=43.2432432432432, Blast_Score=172, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17551758, Length=216, Percent_Identity=32.4074074074074, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6324669, Length=247, Percent_Identity=31.5789473684211, Blast_Score=88, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281364072, Length=195, Percent_Identity=32.8205128205128, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 29036; Mature: 29036

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNQHQQNNSSKCLDLRLKISLKNPYRFWRSNMSMAQRFIENQSQDCLRTKAAKVALEQV
CCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKTLTPSSVIGIGTGATVEVFIQLLKESGAEFAHCVSSSVRSSRALSSAGLNEISISECG
HHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCC
RVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFITIADSGRLVTQLGKFPLPVE
CEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCE
VLPAAQTAVFNALQSLGGHPTLRQDCTTDNGNIILDVAHLDIAEPKRLELQINAIPGVVE
ECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHH
NGIFAQRTADFMAFSNAEGTYLLSKQHVQ
CCCHHHHHHHHHEECCCCCEEEECCCCCC
>Mature Secondary Structure
MVNQHQQNNSSKCLDLRLKISLKNPYRFWRSNMSMAQRFIENQSQDCLRTKAAKVALEQV
CCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LKTLTPSSVIGIGTGATVEVFIQLLKESGAEFAHCVSSSVRSSRALSSAGLNEISISECG
HHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHCC
RVDFYIDGIDEGLTTGMTVKGGGAALAREKVLATLALSFITIADSGRLVTQLGKFPLPVE
CEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCE
VLPAAQTAVFNALQSLGGHPTLRQDCTTDNGNIILDVAHLDIAEPKRLELQINAIPGVVE
ECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCHHH
NGIFAQRTADFMAFSNAEGTYLLSKQHVQ
CCCHHHHHHHHHEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA