| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708172
Identifier: 218708172
GI number: 218708172
Start: 97669
End: 98109
Strand: Direct
Name: 218708172
Synonym: VS_0106
Alternate gene names: NA
Gene position: 97669-98109 (Clockwise)
Preceding gene: 218708171
Following gene: 218708173
Centisome position: 2.96
GC content: 42.63
Gene sequence:
>441_bases ATGTCAGTCATAGTACGTGAAGGTTCACTGGAAGAGGTTGTGTCTGTTGTCGAGCAGATCTCTGAGTTTGCTAGAAAAGA GAGTGTCGCTTCACTGGCAGCTCGGCTTGAAGGGAAAAAGAGCCTGATCTTAGTGGCTGAAGAGGCGAACGTGTTACTCG GCTTTAAAATTGGTTATGAGCTTAACTCAAATACTTTCTATAGTTGGTTTGGTGGTGTGTCACCGCTTGCAAGAAATAAG GGGGTCGCACAGGCTCAATTAGATGTTCAGGAGCAGTGGGCACAAGAGCGGGGTTATGAGCAGCTGAAAGTAAAATCTCG TAACCAGTTTCCTGCGATGCTGTGTTTACTATTGAAAAATGGATATCGAATAGAAAAACTGGAAGAAAAAGAAGAGATTA ATGAAAATCGAATCCATTTCGTGAAGCAATTATCAGCTTAA
Upstream 100 bases:
>100_bases GCACTTAAAAGAAAAGTAACAACTCAACGTTAACTTAAGTGATATTCAGTAAAAGGGTTGGCCATTGTGTCAGCCCTTTC GCTTATGAGGATGAAAGAAG
Downstream 100 bases:
>100_bases TGATTTGCTTTATCGGGGGGATAAATCATTTAAAATGAATTTAATGAGATTTATTATCATTTAGTTGTTGACTATTAAAT GAGAATCATTATTATTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSVIVREGSLEEVVSVVEQISEFARKESVASLAARLEGKKSLILVAEEANVLLGFKIGYELNSNTFYSWFGGVSPLARNK GVAQAQLDVQEQWAQERGYEQLKVKSRNQFPAMLCLLLKNGYRIEKLEEKEEINENRIHFVKQLSA
Sequences:
>Translated_146_residues MSVIVREGSLEEVVSVVEQISEFARKESVASLAARLEGKKSLILVAEEANVLLGFKIGYELNSNTFYSWFGGVSPLARNK GVAQAQLDVQEQWAQERGYEQLKVKSRNQFPAMLCLLLKNGYRIEKLEEKEEINENRIHFVKQLSA >Mature_145_residues SVIVREGSLEEVVSVVEQISEFARKESVASLAARLEGKKSLILVAEEANVLLGFKIGYELNSNTFYSWFGGVSPLARNKG VAQAQLDVQEQWAQERGYEQLKVKSRNQFPAMLCLLLKNGYRIEKLEEKEEINENRIHFVKQLSA
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16533; Mature: 16402
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIVREGSLEEVVSVVEQISEFARKESVASLAARLEGKKSLILVAEEANVLLGFKIGYE CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEE LNSNTFYSWFGGVSPLARNKGVAQAQLDVQEQWAQERGYEQLKVKSRNQFPAMLCLLLKN ECCCEEEHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHC GYRIEKLEEKEEINENRIHFVKQLSA CCCCHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SVIVREGSLEEVVSVVEQISEFARKESVASLAARLEGKKSLILVAEEANVLLGFKIGYE EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEEEE LNSNTFYSWFGGVSPLARNKGVAQAQLDVQEQWAQERGYEQLKVKSRNQFPAMLCLLLKN ECCCEEEHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHC GYRIEKLEEKEEINENRIHFVKQLSA CCCCHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA