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The map label for this gene is yigM [H]

Identifier: 218708155

GI number: 218708155

Start: 83409

End: 84287

Strand: Reverse

Name: yigM [H]

Synonym: VS_0089

Alternate gene names: 218708155

Gene position: 84287-83409 (Counterclockwise)

Preceding gene: 218708156

Following gene: 218708151

Centisome position: 2.55

GC content: 45.73

Gene sequence:

>879_bases
ATGAGCTATTTAGCTAGTGTTACCCTCTTATGGGCCTTCTCTTTTAGCCTGATCGGCGTTTACCTTGCTGGTCAGGTTGA
TTCTTGGTTCTCTGTATTAATGCGTGTTGCCCTTGCTGGCATTGTATTTCTTCCTTTCCTGAAGTTTCGAGGTATCTCGC
GTAAGCTGATAGCTAAGTTGATGACGATTGGTGGTATCCAGCTTGGGCTGATGTACTGCTTCTATTACCAATCTTTCTTG
CTGCTATCCGTTCCTGAAGTCCTTCTGTTTACCGTTTTTACCCCAATTTACGTCACGCTTATTTATGACTTCCTCAAAGG
ACAATTCTCTCCGTGGTATTTAGTGACAGCGGCGATTGCTGTATTGGGCGCTGTATTCATTAAATTCGCGGGTATCAACG
AAAACTTTTTAGTCGGTTTCCTCGTAGTCCAAGGTGCAAACCTGTGCTTTGCTATCGGCCAAGTTGCTTACAAAGTAGTG
ATGGAGAAGGAATCGACAGAGTTACCTCAGCGCACAGTATTTGGTTACTTCTATTTGGGTGCGTTATGCGTCGCTTCGGT
TGCTTTCATACTCTTAGGTAACCCTGAGAAGCTGCCAACAACCACTCTTCAATGGGGCATCCTGATTTATCTTGGCTTGA
TTGCTTCGGGGCTAGGTTACTTTATGTGGAATAAAGGTGCATGCATGGTGAATGCTGGTGCACTGGCTGTAATGAACAAC
GCCTTAGTTCCAGCCGGCCTTGTAGTGAACATCCTTATTTGGAACAGAGACGTCGACTTGATTCGATTGGCCATTGGCGG
CGCGGTTATCTTGTTCTCTCTATTCGTCAACGAGACATGGGTGAAAAAGCGTGTTGCGAGATCCACAAGCAACGCCTAA

Upstream 100 bases:

>100_bases
TCGCCGGTTGATATGCTGGTCGTGCCTCTAAGAGATTCAGAAGACTAATGAATTAAGGTTAGGTAACATACAGCTCATAT
CTTATTAACGAAGTTTTTAT

Downstream 100 bases:

>100_bases
CCGCTTTCACTGAGCTAAGTGAACTAAACTAAGCTAAGTGAGCAGAGCTAAATGAGTTAGCTCTGATAACCCCAAAAAGC
AAAAGAGCGACCTTAGGTCG

Product: putative acetate efflux pump MadN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSYLASVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALAGIVFLPFLKFRGISRKLIAKLMTIGGIQLGLMYCFYYQSFL
LLSVPEVLLFTVFTPIYVTLIYDFLKGQFSPWYLVTAAIAVLGAVFIKFAGINENFLVGFLVVQGANLCFAIGQVAYKVV
MEKESTELPQRTVFGYFYLGALCVASVAFILLGNPEKLPTTTLQWGILIYLGLIASGLGYFMWNKGACMVNAGALAVMNN
ALVPAGLVVNILIWNRDVDLIRLAIGGAVILFSLFVNETWVKKRVARSTSNA

Sequences:

>Translated_292_residues
MSYLASVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALAGIVFLPFLKFRGISRKLIAKLMTIGGIQLGLMYCFYYQSFL
LLSVPEVLLFTVFTPIYVTLIYDFLKGQFSPWYLVTAAIAVLGAVFIKFAGINENFLVGFLVVQGANLCFAIGQVAYKVV
MEKESTELPQRTVFGYFYLGALCVASVAFILLGNPEKLPTTTLQWGILIYLGLIASGLGYFMWNKGACMVNAGALAVMNN
ALVPAGLVVNILIWNRDVDLIRLAIGGAVILFSLFVNETWVKKRVARSTSNA
>Mature_291_residues
SYLASVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALAGIVFLPFLKFRGISRKLIAKLMTIGGIQLGLMYCFYYQSFLL
LSVPEVLLFTVFTPIYVTLIYDFLKGQFSPWYLVTAAIAVLGAVFIKFAGINENFLVGFLVVQGANLCFAIGQVAYKVVM
EKESTELPQRTVFGYFYLGALCVASVAFILLGNPEKLPTTTLQWGILIYLGLIASGLGYFMWNKGACMVNAGALAVMNNA
LVPAGLVVNILIWNRDVDLIRLAIGGAVILFSLFVNETWVKKRVARSTSNA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI1790261, Length=292, Percent_Identity=50, Blast_Score=288, Evalue=2e-79,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32137; Mature: 32006

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLASVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALAGIVFLPFLKFRGISRKLIAKL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MTIGGIQLGLMYCFYYQSFLLLSVPEVLLFTVFTPIYVTLIYDFLKGQFSPWYLVTAAIA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLGAVFIKFAGINENFLVGFLVVQGANLCFAIGQVAYKVVMEKESTELPQRTVFGYFYLG
HHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ALCVASVAFILLGNPEKLPTTTLQWGILIYLGLIASGLGYFMWNKGACMVNAGALAVMNN
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCC
ALVPAGLVVNILIWNRDVDLIRLAIGGAVILFSLFVNETWVKKRVARSTSNA
CCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SYLASVTLLWAFSFSLIGVYLAGQVDSWFSVLMRVALAGIVFLPFLKFRGISRKLIAKL
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
MTIGGIQLGLMYCFYYQSFLLLSVPEVLLFTVFTPIYVTLIYDFLKGQFSPWYLVTAAIA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
VLGAVFIKFAGINENFLVGFLVVQGANLCFAIGQVAYKVVMEKESTELPQRTVFGYFYLG
HHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ALCVASVAFILLGNPEKLPTTTLQWGILIYLGLIASGLGYFMWNKGACMVNAGALAVMNN
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCC
ALVPAGLVVNILIWNRDVDLIRLAIGGAVILFSLFVNETWVKKRVARSTSNA
CCCCCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]