Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218708144

Identifier: 218708144

GI number: 218708144

Start: 68416

End: 69333

Strand: Direct

Name: 218708144

Synonym: VS_0078

Alternate gene names: NA

Gene position: 68416-69333 (Clockwise)

Preceding gene: 218708143

Following gene: 218708145

Centisome position: 2.07

GC content: 44.01

Gene sequence:

>918_bases
ATGGGGCTTATTGCTGCATTTCTGTTGGTATCAAGCCAAGTTAATGCCGAATCGGTTCTATGCGATGCGACTCAGGCAAG
CACCAATCAGTTACCACAGCTAGAACAATCATGTCCGATTGGTAAAGGTGTTTGGGGCAGTAAAGCGCCTAAACATCATT
CAGATAATGAGCTGTTTTGGGTTCAATGTGGTTTGTTGAATAAGCCTTTGTCACTGAGCAAAGCAAAGCCATTGTATGAG
AAGATTTCAACGAACGTATGGATGAAGCCCGAAGGTGGAGACTATCGCTGCCTAATTGGTCCTTATTCTACTTTCTCTGA
TGCGAGAAAAGACTTAGCTCAGGTGCGTAAGGTTTCTGGCTATGGCGAAGCCTTTATTCGTATGGTTGATAAATCGAAGA
CCTCTTCTTCACAACCGGTCGTGACCAAAGCAATGAAGTCAAAAACGGCAGAGCCAAAAACGGTTAAGGCTAAAGTAGCA
GCGAAACCAGCACCAAAGCCGATAGCTGCTGCTCAAAAAGCTGCAGTCGCGAGTGCTGCTGCCATTCAAGCTTTTCCTAG
TCATGGTGCAAATTCAGACAATGATCTGAACATTGAAATACGCATGACAGCGAGTGTTGCGGGTAGTAAATATGCGATTC
CTTATCTTTTAGGTGATGAACAACAGTTTTATATGGAGCAAGGTAAACCTTGGAGCCGACTCGATTACGACAGTGCCGAA
TTAGTATGTGATAAGATTAATATGACGCTGTTGAGTGAAAAGCAGTGGCAAAGTCTCTTAGGGTCGAAGGTCATGGAAAA
TCAGAATTGGCCAATGCACCTGCCTTATTGGGGCGCAGACAAAAAAGGCCTGTTTACTAACGGTAACGTAAACCAGCTTA
AAGGCTCCTCACTACTTAATGTGATGTGTGTGAAATAA

Upstream 100 bases:

>100_bases
CGACACTTGTTCGGTAATAATTAACCCCTAGGGGGTTTAAGTGGTGGTTATGAAGTTGACAATGAATGTTGTATGTCGTG
CTGTGGTTAGAAATTATCGT

Downstream 100 bases:

>100_bases
CGAAGACGTGCGTAAGACCAGATAAGCCTCAGCCATTGCTGGGGCTTTGTTGTTTATACGCCTTTCTTTTCAATATCAGG
TCGATTTCCGGATACTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGLIAAFLLVSSQVNAESVLCDATQASTNQLPQLEQSCPIGKGVWGSKAPKHHSDNELFWVQCGLLNKPLSLSKAKPLYE
KISTNVWMKPEGGDYRCLIGPYSTFSDARKDLAQVRKVSGYGEAFIRMVDKSKTSSSQPVVTKAMKSKTAEPKTVKAKVA
AKPAPKPIAAAQKAAVASAAAIQAFPSHGANSDNDLNIEIRMTASVAGSKYAIPYLLGDEQQFYMEQGKPWSRLDYDSAE
LVCDKINMTLLSEKQWQSLLGSKVMENQNWPMHLPYWGADKKGLFTNGNVNQLKGSSLLNVMCVK

Sequences:

>Translated_305_residues
MGLIAAFLLVSSQVNAESVLCDATQASTNQLPQLEQSCPIGKGVWGSKAPKHHSDNELFWVQCGLLNKPLSLSKAKPLYE
KISTNVWMKPEGGDYRCLIGPYSTFSDARKDLAQVRKVSGYGEAFIRMVDKSKTSSSQPVVTKAMKSKTAEPKTVKAKVA
AKPAPKPIAAAQKAAVASAAAIQAFPSHGANSDNDLNIEIRMTASVAGSKYAIPYLLGDEQQFYMEQGKPWSRLDYDSAE
LVCDKINMTLLSEKQWQSLLGSKVMENQNWPMHLPYWGADKKGLFTNGNVNQLKGSSLLNVMCVK
>Mature_304_residues
GLIAAFLLVSSQVNAESVLCDATQASTNQLPQLEQSCPIGKGVWGSKAPKHHSDNELFWVQCGLLNKPLSLSKAKPLYEK
ISTNVWMKPEGGDYRCLIGPYSTFSDARKDLAQVRKVSGYGEAFIRMVDKSKTSSSQPVVTKAMKSKTAEPKTVKAKVAA
KPAPKPIAAAQKAAVASAAAIQAFPSHGANSDNDLNIEIRMTASVAGSKYAIPYLLGDEQQFYMEQGKPWSRLDYDSAEL
VCDKINMTLLSEKQWQSLLGSKVMENQNWPMHLPYWGADKKGLFTNGNVNQLKGSSLLNVMCVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33277; Mature: 33145

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIAAFLLVSSQVNAESVLCDATQASTNQLPQLEQSCPIGKGVWGSKAPKHHSDNELFW
CHHHHHHHHHHCCCCHHHEEECCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEE
VQCGLLNKPLSLSKAKPLYEKISTNVWMKPEGGDYRCLIGPYSTFSDARKDLAQVRKVSG
EEECCCCCCCCCCCCCHHHHHHCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
YGEAFIRMVDKSKTSSSQPVVTKAMKSKTAEPKTVKAKVAAKPAPKPIAAAQKAAVASAA
CHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
AIQAFPSHGANSDNDLNIEIRMTASVAGSKYAIPYLLGDEQQFYMEQGKPWSRLDYDSAE
HHHHHCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCHH
LVCDKINMTLLSEKQWQSLLGSKVMENQNWPMHLPYWGADKKGLFTNGNVNQLKGSSLLN
HHHHHCCCEEECHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCHHHCCCCCEEE
VMCVK
EEECC
>Mature Secondary Structure 
GLIAAFLLVSSQVNAESVLCDATQASTNQLPQLEQSCPIGKGVWGSKAPKHHSDNELFW
HHHHHHHHHHCCCCHHHEEECCCCCCHHCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEE
VQCGLLNKPLSLSKAKPLYEKISTNVWMKPEGGDYRCLIGPYSTFSDARKDLAQVRKVSG
EEECCCCCCCCCCCCCHHHHHHCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC
YGEAFIRMVDKSKTSSSQPVVTKAMKSKTAEPKTVKAKVAAKPAPKPIAAAQKAAVASAA
CHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
AIQAFPSHGANSDNDLNIEIRMTASVAGSKYAIPYLLGDEQQFYMEQGKPWSRLDYDSAE
HHHHHCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCHH
LVCDKINMTLLSEKQWQSLLGSKVMENQNWPMHLPYWGADKKGLFTNGNVNQLKGSSLLN
HHHHHCCCEEECHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEEECCCHHHCCCCCEEE
VMCVK
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA