Click here to switch to the map view.

The map label for this gene is yigZ [C]

Identifier: 218708129

GI number: 218708129

Start: 41090

End: 41713

Strand: Direct

Name: yigZ [C]

Synonym: VS_0042

Alternate gene names: 218708129

Gene position: 41090-41713 (Clockwise)

Preceding gene: 218708125

Following gene: 218708130

Centisome position: 1.25

GC content: 45.19

Gene sequence:

>624_bases
ATGAATGAACAGCCCTATTTAATACCGTCAGCGTCGGCTCTGTTTGAAGAAGAGATCAAGAAGAGCGTCTTCATTACTCA
TCTTGCTCATACTCCAAGTGTAGAAGCTGCTAAACAGTTCGTAGAACAGGTAAAAAAAGAGCATTCATCAGCGCGACATA
ATTGTTGGGGCTTTGCTGCAGGGCGACCTGAAGACTCAATGCAATGGGGCTTTAGTGACGATGGAGAGCCATCTGGTACT
GCGGGTAAGCCTATCTTGGCGCAACTGTCTGGTTCTGGTGTTGGTGAACTGACAGCTGTTGTTACTCGTTATTCTGGCGG
AATCAAGCTTGGAACGGGTGGCCTAGTAAAGGCTTACGGTGGTGGAGTGCAACAAGCTCTCAAGCTGCTTCAAACTATCG
AGAAAAAAATAACCACAAAATTACGGCTAGAGTTAGACTATGGTTTTGTGCCAATCGCGCAATCCATTATGGCTCAGCAT
CAGGCTGTTGAAGTCCAAGCGGATTATGGTGTTCAAGTTGAGCTTATTATTGAAATAGAGCTCCTTCAGGTAGATTCGTT
TACCCAAACCATGATCAATAAAAGCGGTGCTAAGGCACTGGTAACGAAAGTCAAAGACAACTAG

Upstream 100 bases:

>100_bases
TTTTAAACAATTGTTTAACATTGTGCGATAGCACAGATCCTCTAACCCTTATTATTCACGCGTGATACACTTCGCCGCTC
TTATTAATTAAGTTAACGAT

Downstream 100 bases:

>100_bases
GAAGTGTGAAGCATTTCGCTTCGTTCAATAGCTCATGCAATTTCGCTCAATCATTCGAATCGTCGGATTATTATTAGCAC
TTTTTAGTGTATCAATGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNEQPYLIPSASALFEEEIKKSVFITHLAHTPSVEAAKQFVEQVKKEHSSARHNCWGFAAGRPEDSMQWGFSDDGEPSGT
AGKPILAQLSGSGVGELTAVVTRYSGGIKLGTGGLVKAYGGGVQQALKLLQTIEKKITTKLRLELDYGFVPIAQSIMAQH
QAVEVQADYGVQVELIIEIELLQVDSFTQTMINKSGAKALVTKVKDN

Sequences:

>Translated_207_residues
MNEQPYLIPSASALFEEEIKKSVFITHLAHTPSVEAAKQFVEQVKKEHSSARHNCWGFAAGRPEDSMQWGFSDDGEPSGT
AGKPILAQLSGSGVGELTAVVTRYSGGIKLGTGGLVKAYGGGVQQALKLLQTIEKKITTKLRLELDYGFVPIAQSIMAQH
QAVEVQADYGVQVELIIEIELLQVDSFTQTMINKSGAKALVTKVKDN
>Mature_207_residues
MNEQPYLIPSASALFEEEIKKSVFITHLAHTPSVEAAKQFVEQVKKEHSSARHNCWGFAAGRPEDSMQWGFSDDGEPSGT
AGKPILAQLSGSGVGELTAVVTRYSGGIKLGTGGLVKAYGGGVQQALKLLQTIEKKITTKLRLELDYGFVPIAQSIMAQH
QAVEVQADYGVQVELIIEIELLQVDSFTQTMINKSGAKALVTKVKDN

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

Organism=Escherichia coli, GI87082338, Length=192, Percent_Identity=53.125, Blast_Score=171, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 22360; Mature: 22360

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQPYLIPSASALFEEEIKKSVFITHLAHTPSVEAAKQFVEQVKKEHSSARHNCWGFAA
CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
GRPEDSMQWGFSDDGEPSGTAGKPILAQLSGSGVGELTAVVTRYSGGIKLGTGGLVKAYG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCEEECCC
GGVQQALKLLQTIEKKITTKLRLELDYGFVPIAQSIMAQHQAVEVQADYGVQVELIIEIE
CCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEEEE
LLQVDSFTQTMINKSGAKALVTKVKDN
EEEECHHHHHHHCCCCCCEEHEECCCC
>Mature Secondary Structure
MNEQPYLIPSASALFEEEIKKSVFITHLAHTPSVEAAKQFVEQVKKEHSSARHNCWGFAA
CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
GRPEDSMQWGFSDDGEPSGTAGKPILAQLSGSGVGELTAVVTRYSGGIKLGTGGLVKAYG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEECCCCEEECCC
GGVQQALKLLQTIEKKITTKLRLELDYGFVPIAQSIMAQHQAVEVQADYGVQVELIIEIE
CCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHEEEEECCCCEEEEEEEEE
LLQVDSFTQTMINKSGAKALVTKVKDN
EEEECHHHHHHHCCCCCCEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]