Click here to switch to the map view.

The map label for this gene is ydcK [H]

Identifier: 218704897

GI number: 218704897

Start: 1693048

End: 1694028

Strand: Reverse

Name: ydcK [H]

Synonym: ECUMN_1676

Alternate gene names: 218704897

Gene position: 1694028-1693048 (Counterclockwise)

Preceding gene: 218704901

Following gene: 218704894

Centisome position: 32.56

GC content: 48.11

Gene sequence:

>981_bases
ATGCGCAAATATCGTCTAAGTGAAGAACAGCGAGCCTTTAGTTATCAGGAAGATGGCACTAAAAAAAATGTGTTATTACG
GCAGATTATCGCCATTAGCGATTTTAACGATGTGATAGCAGGAACCGCTGGCGGCTGGATCGATCGCGAAACGGTGTTAG
CACAGGAAGGAAATTGCTGGATTTACGACCAGAATGCTATTGCGTTCGGCGGAACGGTGATTTCCGGTAATACGCGTATC
ACCGGCACCAGCGTGCTGTGGGGAGAGGTTTACGCAACGGATAACGTCTGGATCGATAATAGTGAAATCAGCCAGGGTGC
ATATATAAGTGACAGTGTCACCATTCATGACTCATTAGTTTACGGGCAATGTAGAATATTTGGTCACGCCTTAATTGATC
AACATTCTATGATCGTCGCCGCACAAGGCTTAACGCCCGACCATCAACTCCTGCTCCAAATTTATGATCGCGCAAGGGTT
AGCGCCTCGCGTATTGTCCACCAGGCACAAATTTATGGCGATGCCGTCGTCCGGTATGCTTTTATTGAACATCGCGCCGA
AGTTTTTGATTTTGCCAGCGTTGAAGGTAATGAAGAGAACAACGTCTGGCTATGCGATTGCGCTAAAGTCTACGGTCACG
CGCAGGTGAAAGCTGGCATAGAAGAAGATGCCATTCCGACGATTCATTACAGTTCGCAGGTGGCGGAATATGCCATTGTG
GAAGGTAATTGTGTGTTAAAACATCATGTCTTGATTGGCGGAAATGCCGTGGTATGTGGCGGACCGATTCTGCTCGACGA
GCACGTTGTCATACAAGGTGAGAGCCGTATTACAGGTGCGGTGATAATTGAAAACCATGTGGAGTTAACCGACCACGCCG
TCGTTGAAGCCTTTGATGGCGACACGGTTCATGTCCGTGGTCCAAAAGTCATTAACGGCGAGGAACGCATTACTCGAACG
CCACTGGCAGGGTTATTGTGA

Upstream 100 bases:

>100_bases
TATAAAGTATATTTGAAATGCATTTTATGGAATTTTCTCGAGCATAGCCAGAGCCGCAGAATTTGCTACGGTTATAGTAA
GTCACCTGTGGGAAAACGCT

Downstream 100 bases:

>100_bases
ATCGATAATAAGCGCGTATAAGTTCACATCATCATAGGCATCATTCAGGAACTCAGCCTGTTTCAGGCAACCTTCAAGGA
TAAAACCATTACGCAAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Sequences:

>Translated_326_residues
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL
>Mature_326_residues
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGTVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=98.7730061349693, Blast_Score=658, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35827; Mature: 35827

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV
EEECCEEEECCEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEEEEEE
YGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYA
EEEEEEEEHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHEEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCEEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC
>Mature Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGTVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV
EEECCEEEECCEEEECCEEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEEEEEE
YGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYA
EEEEEEEEHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEVFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHEEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVCGGPILLDEHVVIQGESRITGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCEEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]