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The map label for this gene is yadK [H]

Identifier: 218703393

GI number: 218703393

Start: 155666

End: 156265

Strand: Reverse

Name: yadK [H]

Synonym: ECUMN_0134

Alternate gene names: 218703393

Gene position: 156265-155666 (Counterclockwise)

Preceding gene: 218703394

Following gene: 218703392

Centisome position: 3.0

GC content: 41.17

Gene sequence:

>600_bases
ATGCAGATGAAATCATTACATTATGGGATATTTGCAAGCATTACTCTGAGCTTATTATTATTCAGCACGTTTTCTATAGC
CATCACGGATAACATTGGCCTAAACGTTATGACCACTGTTGAAAACAGAACTTGTCAAAGCGAAATCAGCAACCAGGGGT
TGGTTAACCTTGGCACTGTTGGAGTGGGATATTTTGCCAGTAATGTTAGTGCGGAAGATAATTATCCAGGCGGAAAGACC
TTTACTGTGACAGTAAAAGATTGCCCCTCCGCTGGCACAACATCAAGCCAGTTGCATATAGAATTTAAACCTGTCAGTGG
TGTAATGGCCACTGGTAGCCAACAGATATTCGCCAATAATCATGTCGGCGGTGCACAAAATGTAGGAATCGTGATTTTTA
GCCAAAATAATCAGTCATCGGACACAGTGAATGTGCTGTCACCAACAGGGCAGTTTCGCACAGTCTGGCCAGTTGCCTCT
GCAAACATGAATAATTCATCGTGGCAATTTTATACACGAATGCAAAAAATTGATCCGTTACTTCCCGTTGGTGCAGGATT
TGTCACCAGCAATGTATTAGTTGATATTTATTATCAATAA

Upstream 100 bases:

>100_bases
ACGGTAGCACTTCGCGAAACCCGACCAGGTTCAGGAAGAGCAGGTAATTTTAAAGCACTTGCGACATTCAATTTCACCTA
CGAATAAAAGGATAATAATA

Downstream 100 bases:

>100_bases
ATGCCAGACATAACGCATCTACAAATATTATTTTTTCAAAGGAGTGATAAGATGAAGTCAGCGTTCCGATACTTTCTTTT
TTTATGGATTATCACAGCCA

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQMKSLHYGIFASITLSLLLFSTFSIAITDNIGLNVMTTVENRTCQSEISNQGLVNLGTVGVGYFASNVSAEDNYPGGKT
FTVTVKDCPSAGTTSSQLHIEFKPVSGVMATGSQQIFANNHVGGAQNVGIVIFSQNNQSSDTVNVLSPTGQFRTVWPVAS
ANMNNSSWQFYTRMQKIDPLLPVGAGFVTSNVLVDIYYQ

Sequences:

>Translated_199_residues
MQMKSLHYGIFASITLSLLLFSTFSIAITDNIGLNVMTTVENRTCQSEISNQGLVNLGTVGVGYFASNVSAEDNYPGGKT
FTVTVKDCPSAGTTSSQLHIEFKPVSGVMATGSQQIFANNHVGGAQNVGIVIFSQNNQSSDTVNVLSPTGQFRTVWPVAS
ANMNNSSWQFYTRMQKIDPLLPVGAGFVTSNVLVDIYYQ
>Mature_199_residues
MQMKSLHYGIFASITLSLLLFSTFSIAITDNIGLNVMTTVENRTCQSEISNQGLVNLGTVGVGYFASNVSAEDNYPGGKT
FTVTVKDCPSAGTTSSQLHIEFKPVSGVMATGSQQIFANNHVGGAQNVGIVIFSQNNQSSDTVNVLSPTGQFRTVWPVAS
ANMNNSSWQFYTRMQKIDPLLPVGAGFVTSNVLVDIYYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786329, Length=183, Percent_Identity=54.6448087431694, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21393; Mature: 21393

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMKSLHYGIFASITLSLLLFSTFSIAITDNIGLNVMTTVENRTCQSEISNQGLVNLGTV
CCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHCCCCCEEECCE
GVGYFASNVSAEDNYPGGKTFTVTVKDCPSAGTTSSQLHIEFKPVSGVMATGSQQIFANN
EEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEECCCEEEEECC
HVGGAQNVGIVIFSQNNQSSDTVNVLSPTGQFRTVWPVASANMNNSSWQFYTRMQKIDPL
CCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEHHHHCCCC
LPVGAGFVTSNVLVDIYYQ
CCCCCCEEECCEEEEEEEC
>Mature Secondary Structure
MQMKSLHYGIFASITLSLLLFSTFSIAITDNIGLNVMTTVENRTCQSEISNQGLVNLGTV
CCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCHHHHHCCCCCEEECCE
GVGYFASNVSAEDNYPGGKTFTVTVKDCPSAGTTSSQLHIEFKPVSGVMATGSQQIFANN
EEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEECCCEEEEECC
HVGGAQNVGIVIFSQNNQSSDTVNVLSPTGQFRTVWPVASANMNNSSWQFYTRMQKIDPL
CCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCEEEHHHHCCCC
LPVGAGFVTSNVLVDIYYQ
CCCCCCEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]