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The map label for this gene is yadC [H]

Identifier: 218703392

GI number: 218703392

Start: 154364

End: 155614

Strand: Reverse

Name: yadC [H]

Synonym: ECUMN_0133

Alternate gene names: 218703392

Gene position: 155614-154364 (Counterclockwise)

Preceding gene: 218703393

Following gene: 218703391

Centisome position: 2.99

GC content: 39.41

Gene sequence:

>1251_bases
ATGAAGTCAGCGTTCCGATACTTTCTTTTTTTATGGATTATCACAGCCAGCATTAATAATGTAAATGCTGAAAATCTTAC
TTTTATGGTCGGTGACGATGCTGGCGTAGGAAACCTTAATGGCCCATCAGGCGATAAACTAATATCATTTTCCTATCCGG
TTGGTGGAGTAAACAATATTGTATTTTATAATCCAACATCCACCACACCGACCAATGCAAAAATAAAATTATATTGGAGT
GAACTGGACACATCAAGTAGCCGTGGGTTTGTATATTGTACTTCAAAAAATAATTCCAGCGGTATGCCAATTACTGTCCG
GCATAACATGGTTGACTCAGGAAAAATGGCAGATGGGCACAGATTATATGAAACTAATGTAACCGGTCTATATTATACGT
TAATGCTCAATAGATTCTGGTCGTATGAACTTCGCTCAAGCTCTCCAGATATATACGTTGGAGACGATGGCTGGCACACT
GTACAATTTTCTATTACGGGTGATTATATACGAGGTCAATGTAATACTTCCAGGTATCAAGCAGTCGGAGGTCTTTTGCA
CGATGCCACGGTGGAATTCTATACCGACAGCAGTTTTAACCCTGCTCCAAATACTAACGTGCAATTAAAACATACTGGTG
ATTATTTGTATTCATTCGCAAATGAAGGGCCAGGGGTTCCAAATGTAAGTGCATCTAAGATGCTAAAAATCAATTTTAAT
TTAACAGACATCAATATCCAACTGCCAACATGCTTTACGTCTATCCTTTTGGGTGAGAGCGTAACGCGATCAACCGTAAA
TCTCGGGGAATATACTGTTGGACAGATCACCTCAGATTCTGCAACACCTGTTAATTTTCAGATCTCGCTACAAAATTGTG
TTCGTATAAGCAGTATTAAAACAAAACTAAAATCTAATGTAGTAGGAGTGAATAATCCTCTGTTGCTTGGTAATACTTTG
ACAGGAACCGATGATGCAAAAGGTGCCGGAGTACTTATTGAAGGGTTACCCAACAGCAAAAATTCACAAAATTTCACGCT
TAAGCCAAATGATGAGACATCAAGCTATAACGATGCTGAAGATGATCCTGGAGAAAACAATGGAATTTATAACCCAGATT
ATCCTAATGCCAACGGTCGTACTACAACCCAGGACCTGAAATTTCAGGCAACATTAAAACGCGATGGTAATGCAACTGTG
AAACCCGGCGGATTTAAGGCTACCAGTACATTCCAGGTCACCTACGAGTAA

Upstream 100 bases:

>100_bases
TGCAGGATTTGTCACCAGCAATGTATTAGTTGATATTTATTATCAATAAATGCCAGACATAACGCATCTACAAATATTAT
TTTTTCAAAGGAGTGATAAG

Downstream 100 bases:

>100_bases
CAGGTTTAACCGCACCGCCATCATCTGGCGGTGCTGTAATTGATAAATCATTGCCCCCACCAATGTGACTGATAAAATGC
CAGACAGCACGACATTACTT

Product: putative fimbrial-like adhesin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MKSAFRYFLFLWIITASINNVNAENLTFMVGDDAGVGNLNGPSGDKLISFSYPVGGVNNIVFYNPTSTTPTNAKIKLYWS
ELDTSSSRGFVYCTSKNNSSGMPITVRHNMVDSGKMADGHRLYETNVTGLYYTLMLNRFWSYELRSSSPDIYVGDDGWHT
VQFSITGDYIRGQCNTSRYQAVGGLLHDATVEFYTDSSFNPAPNTNVQLKHTGDYLYSFANEGPGVPNVSASKMLKINFN
LTDINIQLPTCFTSILLGESVTRSTVNLGEYTVGQITSDSATPVNFQISLQNCVRISSIKTKLKSNVVGVNNPLLLGNTL
TGTDDAKGAGVLIEGLPNSKNSQNFTLKPNDETSSYNDAEDDPGENNGIYNPDYPNANGRTTTQDLKFQATLKRDGNATV
KPGGFKATSTFQVTYE

Sequences:

>Translated_416_residues
MKSAFRYFLFLWIITASINNVNAENLTFMVGDDAGVGNLNGPSGDKLISFSYPVGGVNNIVFYNPTSTTPTNAKIKLYWS
ELDTSSSRGFVYCTSKNNSSGMPITVRHNMVDSGKMADGHRLYETNVTGLYYTLMLNRFWSYELRSSSPDIYVGDDGWHT
VQFSITGDYIRGQCNTSRYQAVGGLLHDATVEFYTDSSFNPAPNTNVQLKHTGDYLYSFANEGPGVPNVSASKMLKINFN
LTDINIQLPTCFTSILLGESVTRSTVNLGEYTVGQITSDSATPVNFQISLQNCVRISSIKTKLKSNVVGVNNPLLLGNTL
TGTDDAKGAGVLIEGLPNSKNSQNFTLKPNDETSSYNDAEDDPGENNGIYNPDYPNANGRTTTQDLKFQATLKRDGNATV
KPGGFKATSTFQVTYE
>Mature_416_residues
MKSAFRYFLFLWIITASINNVNAENLTFMVGDDAGVGNLNGPSGDKLISFSYPVGGVNNIVFYNPTSTTPTNAKIKLYWS
ELDTSSSRGFVYCTSKNNSSGMPITVRHNMVDSGKMADGHRLYETNVTGLYYTLMLNRFWSYELRSSSPDIYVGDDGWHT
VQFSITGDYIRGQCNTSRYQAVGGLLHDATVEFYTDSSFNPAPNTNVQLKHTGDYLYSFANEGPGVPNVSASKMLKINFN
LTDINIQLPTCFTSILLGESVTRSTVNLGEYTVGQITSDSATPVNFQISLQNCVRISSIKTKLKSNVVGVNNPLLLGNTL
TGTDDAKGAGVLIEGLPNSKNSQNFTLKPNDETSSYNDAEDDPGENNGIYNPDYPNANGRTTTQDLKFQATLKRDGNATV
KPGGFKATSTFQVTYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786328, Length=423, Percent_Identity=47.7541371158392, Blast_Score=334, Evalue=5e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- InterPro:   IPR017014 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 45484; Mature: 45484

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAFRYFLFLWIITASINNVNAENLTFMVGDDAGVGNLNGPSGDKLISFSYPVGGVNNI
CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEE
VFYNPTSTTPTNAKIKLYWSELDTSSSRGFVYCTSKNNSSGMPITVRHNMVDSGKMADGH
EEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
RLYETNVTGLYYTLMLNRFWSYELRSSSPDIYVGDDGWHTVQFSITGDYIRGQCNTSRYQ
EEEEECCCCEEEEEHHHHHCCEEECCCCCCEEECCCCCEEEEEEEECCEEECCCCCCHHH
AVGGLLHDATVEFYTDSSFNPAPNTNVQLKHTGDYLYSFANEGPGVPNVSASKMLKINFN
HHCCEEECCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCEEEEEEEE
LTDINIQLPTCFTSILLGESVTRSTVNLGEYTVGQITSDSATPVNFQISLQNCVRISSIK
EEEEEEECHHHHHHHHHCCCHHHCEEECCCEEEEEEECCCCCCEEEEEEHHHHEEHHHHH
TKLKSNVVGVNNPLLLGNTLTGTDDAKGAGVLIEGLPNSKNSQNFTLKPNDETSSYNDAE
HHHHCCEECCCCCEEECCEECCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCC
DDPGENNGIYNPDYPNANGRTTTQDLKFQATLKRDGNATVKPGGFKATSTFQVTYE
CCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCEECCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKSAFRYFLFLWIITASINNVNAENLTFMVGDDAGVGNLNGPSGDKLISFSYPVGGVNNI
CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEE
VFYNPTSTTPTNAKIKLYWSELDTSSSRGFVYCTSKNNSSGMPITVRHNMVDSGKMADGH
EEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCC
RLYETNVTGLYYTLMLNRFWSYELRSSSPDIYVGDDGWHTVQFSITGDYIRGQCNTSRYQ
EEEEECCCCEEEEEHHHHHCCEEECCCCCCEEECCCCCEEEEEEEECCEEECCCCCCHHH
AVGGLLHDATVEFYTDSSFNPAPNTNVQLKHTGDYLYSFANEGPGVPNVSASKMLKINFN
HHCCEEECCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCEEEEEEEE
LTDINIQLPTCFTSILLGESVTRSTVNLGEYTVGQITSDSATPVNFQISLQNCVRISSIK
EEEEEEECHHHHHHHHHCCCHHHCEEECCCEEEEEEECCCCCCEEEEEEHHHHEEHHHHH
TKLKSNVVGVNNPLLLGNTLTGTDDAKGAGVLIEGLPNSKNSQNFTLKPNDETSSYNDAE
HHHHCCEECCCCCEEECCEECCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCC
DDPGENNGIYNPDYPNANGRTTTQDLKFQATLKRDGNATVKPGGFKATSTFQVTYE
CCCCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCEECCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 8096212 [H]