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The map label for this gene is yhdU

Identifier: 218702036

GI number: 218702036

Start: 3927188

End: 3927367

Strand: Direct

Name: yhdU

Synonym: ECIAI39_3763

Alternate gene names: 218702036

Gene position: 3927188-3927367 (Clockwise)

Preceding gene: 218702035

Following gene: 218702038

Centisome position: 76.52

GC content: 40.56

Gene sequence:

>180_bases
ATGATTCGCAAGTATTGGTGGCTCGTCGTTTTCGCTGTCTTCGTTTTTCTGTTTGATACTTTACTGATGCAGTGGATTGA
ACTGCTGGCAACAGAAACAGACAAATGCCGCAATATGAACTCAGTTAATCCACTAAAACTGGTTAACTGTGACGAACTGA
ATTTTCAGGACAGAATGTGA

Upstream 100 bases:

>100_bases
ATCTCATTGCAAAGTAAAGGAAGTGTAAGCCTGGTTTTCAGATTATTCATTTCGTGTATATTTCCTGCCAGACTTGGTTA
AACATGCACAGGCTCAGGTA

Downstream 100 bases:

>100_bases
ATTTATATGACACTTAATTCATTCGTTTGATGAATTAATTTCGTTATGTTTTCATCTGGCATGAACATTCTTAATACGTT
ATCGACCAGTGCGGGTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM

Sequences:

>Translated_59_residues
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
>Mature_59_residues
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789663, Length=59, Percent_Identity=100, Blast_Score=121, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHDU_ECO57 (P64621)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C85991
- PIR:   G91145
- RefSeq:   NP_289831.1
- RefSeq:   NP_312162.1
- ProteinModelPortal:   P64621
- EnsemblBacteria:   EBESCT00000024742
- EnsemblBacteria:   EBESCT00000059727
- GeneID:   916017
- GeneID:   958704
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4623
- KEGG:   ecs:ECs4135
- GeneTree:   EBGT00050000010485
- HOGENOM:   HBG468900
- OMA:   WIKLMAT
- ProtClustDB:   CLSK880626
- BioCyc:   ECOL83334:ECS4135-MONOMER
- InterPro:   IPR022540
- ProDom:   PD052549

Pfam domain/function: PF10831 DUF2556

EC number: NA

Molecular weight: Translated: 7204; Mature: 7204

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x25b0f75c)-;

Cys/Met content:

3.4 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEECCCCCCCCCCCH
>Mature Secondary Structure
MIRKYWWLVVFAVFVFLFDTLLMQWIELLATETDKCRNMNSVNPLKLVNCDELNFQDRM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEECCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796