Click here to switch to the map view.

The map label for this gene is yhaV

Identifier: 218701903

GI number: 218701903

Start: 3790181

End: 3790645

Strand: Direct

Name: yhaV

Synonym: ECIAI39_3629

Alternate gene names: 218701903

Gene position: 3790181-3790645 (Clockwise)

Preceding gene: 218701902

Following gene: 218701905

Centisome position: 73.85

GC content: 44.09

Gene sequence:

>465_bases
ATGGATTTTCCACAAAGGGTTAATGGTTGGGCGCTATATGCTCATCCCTGTTTTCAGGAAACCTACGACGCTTTAGTTGC
CGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTAGTCCATA
AAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCATGGCAAGTCGTTAGGCTCTGGGAAAAAT
AAAGACTGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCAT
TCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGT
TAAAAAGAGGACATCCTCCTGCCGACTGGGAAACCCTCACCCGAGAGACAGAAGAAACCCATTGA

Upstream 100 bases:

>100_bases
ACAACCCGCAAATAACTCGTCCATTCAACATTCAACAAGGAAAGAAACTTGTCGCAGGCATGGACGTCAACATTGATGAT
GAGATTGGCGACGACGAATA

Downstream 100 bases:

>100_bases
TGGTGTTCACAATGCCCGCCGAACGCATTCGTGTTGACCAGCGGGCACCCTTTCTCACTCCCCGACCAGAATCACTTCAA
CCCCAGCCTTTCGCAGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKN
KDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH

Sequences:

>Translated_154_residues
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKN
KDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
>Mature_154_residues
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHITVNPSSPAFRHGKSLGSGKN
KDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTYGKKTDAYTVFSKMLKRGHPPADWETLTRETEETH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789518, Length=154, Percent_Identity=100, Blast_Score=324, Evalue=1e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YHAV_ECO57 (P64595)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   H85974
- PIR:   H91129
- RefSeq:   NP_289701.1
- RefSeq:   NP_312035.1
- EnsemblBacteria:   EBESCT00000025616
- EnsemblBacteria:   EBESCT00000056164
- GeneID:   916158
- GeneID:   958363
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4482
- KEGG:   ecs:ECs4008
- GeneTree:   EBGT00050000010447
- HOGENOM:   HBG488289
- OMA:   VNDDSTL
- ProtClustDB:   CLSK880598
- BioCyc:   ECOL83334:ECS4008-MONOMER
- InterPro:   IPR021679

Pfam domain/function: PF11663 Toxin_YhaV

EC number: NA

Molecular weight: Translated: 17836; Mature: 17836

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHI
CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHE
TVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTY
ECCCCCCHHHHCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEEEEEECCCCHHHHH
GKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MDFPQRVNGWALYAHPCFQETYDALVAEVETLKGKDPENYQRKAATKLLAVVHKVIEEHI
CCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHE
TVNPSSPAFRHGKSLGSGKNKDWSRVKFGAGRYRLFFRYSEKEKVIILGWMNDENTLRTY
ECCCCCCHHHHCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCEEEEEEEECCCCHHHHH
GKKTDAYTVFSKMLKRGHPPADWETLTRETEETH
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796